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    ZNF407 zinc finger protein 407 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695303, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZNF407provided by VGNC
    Official Full Name
    zinc finger protein 407provided by VGNC
    Primary source
    VGNC:VGNC:104257
    See related
    Ensembl:ENSMMUG00000008945
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF407 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 18 NC_041771.1 (4948372..5411667, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 18 NC_027910.1 (64758003..65245598)

    Chromosome 18 - NC_041771.1Genomic Context describing neighboring genes Neighboring gene teashirt zinc finger homeobox 1 Neighboring gene prostaglandin reductase 3 Neighboring gene uncharacterized LOC114673692 Neighboring gene uncharacterized LOC700283 Neighboring gene small ubiquitin-related modifier 2 Neighboring gene carnosine dipeptidase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 407

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041771.1 Reference Mmul_10 Primary Assembly

      Range
      4948372..5411667 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001085704.4 → XP_001085704.3  zinc finger protein 407 isoform X1

      UniProtKB/TrEMBL
      H9ZB09
      Related
      ENSMMUP00000011725.4, ENSMMUT00000012502.4
      Conserved Domains (5) summary
      COG5641
      Location:689 → 1043
      GAT1; GATA Zn-finger-containing transcription factor [Transcription]
      sd00017
      Location:1630 → 1650
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00020
      Location:1416 → 1445
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:1628 → 1650
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:1642 → 1669
      zf-H2C2_2; Zinc-finger double domain

    2. XM_028837835.1 → XP_028693668.1  zinc finger protein 407 isoform X2

      Conserved Domains (3) summary
      sd00017
      Location:1658 → 1680
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00020
      Location:1416 → 1445
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:1642 → 1669
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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