The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference Mmul_10 Primary Assembly

Genomic

1. NC_041759.1 Reference Mmul_10 Primary Assembly

   Range

   128874860..129093419 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_015140708.2 → XP_014996194.1  rap guanine nucleotide exchange factor 6 isoform X5

   UniProtKB/TrEMBL

   H9F6S5

   Conserved Domains (7) summary

   smart00229
   Location:378 → 491

   RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif

   COG0664
   Location:240 → 414

   Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]

   cd00038
   Location:246 → 346

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cd00155
   Location:828 → 1052

   RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

   cd00992
   Location:495 → 575

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl00047
   Location:3 → 48

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cl00155
   Location:720 → 804

   UBQ; Ubiquitin-like proteins

2. XM_015140711.2 → XP_014996197.1  rap guanine nucleotide exchange factor 6 isoform X9

   UniProtKB/TrEMBL

   H9F6S5

   Conserved Domains (6) summary

   smart00229
   Location:265 → 378

   RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif

   COG0664
   Location:127 → 301

   Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]

   cd00038
   Location:133 → 233

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cd00155
   Location:715 → 939

   RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

   cd00992
   Location:382 → 462

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl00155
   Location:607 → 691

   UBQ; Ubiquitin-like proteins

3. XM_001101427.4 → XP_001101427.1  rap guanine nucleotide exchange factor 6 isoform X4

   UniProtKB/TrEMBL

   A0A5F8A3P4, H9ZA13

   Related

   ENSMMUP00000071543.1, ENSMMUT00000104766.1

   Conserved Domains (7) summary

   smart00229
   Location:412 → 525

   RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif

   COG0664
   Location:274 → 448

   Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]

   cd00038
   Location:280 → 380

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cd00155
   Location:857 → 1067

   RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

   cd00992
   Location:529 → 609

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl00047
   Location:37 → 82

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cl00155
   Location:749 → 833

   UBQ; Ubiquitin-like proteins

4. XM_015140710.2 → XP_014996196.1  rap guanine nucleotide exchange factor 6 isoform X6

   UniProtKB/TrEMBL

   F7HR13, H9F6S5

   Related

   ENSMMUP00000008113.4, ENSMMUT00000008631.4

   Conserved Domains (6) summary

   smart00229
   Location:317 → 430

   RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif

   COG0664
   Location:179 → 353

   Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]

   cd00038
   Location:185 → 285

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cd00155
   Location:767 → 991

   RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

   cd00992
   Location:434 → 514

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl00155
   Location:659 → 743

   UBQ; Ubiquitin-like proteins

5. XM_015140707.2 → XP_014996193.1  rap guanine nucleotide exchange factor 6 isoform X3

   UniProtKB/TrEMBL

   H9ZA13

   Conserved Domains (7) summary

   smart00229
   Location:412 → 525

   RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif

   COG0664
   Location:274 → 448

   Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]

   cd00038
   Location:280 → 380

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cd00155
   Location:862 → 1072

   RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

   cd00992
   Location:529 → 609

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl00047
   Location:37 → 82

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cl00155
   Location:754 → 838

   UBQ; Ubiquitin-like proteins

6. XM_015140706.2 → XP_014996192.1  rap guanine nucleotide exchange factor 6 isoform X1

   UniProtKB/TrEMBL

   F7HST4, H9ZA13

   Related

   ENSMMUP00000008111.4, ENSMMUT00000008629.4

   Conserved Domains (7) summary

   smart00229
   Location:412 → 525

   RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif

   COG0664
   Location:274 → 448

   Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]

   cd00038
   Location:280 → 380

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cd00155
   Location:862 → 1086

   RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

   cd00992
   Location:529 → 609

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl00047
   Location:37 → 82

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cl00155
   Location:754 → 838

   UBQ; Ubiquitin-like proteins

7. XM_002804506.3 → XP_002804552.1  rap guanine nucleotide exchange factor 6 isoform X8

   See identical proteins and their annotated locations for XP_002804552.1

   UniProtKB/TrEMBL

   H9F7F1

   Conserved Domains (7) summary

   smart00229
   Location:412 → 525

   RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif

   COG0664
   Location:274 → 448

   Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]

   cd00038
   Location:280 → 380

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cd00155
   Location:857 → 1081

   RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

   cd00992
   Location:529 → 609

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl00047
   Location:37 → 82

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cl00155
   Location:749 → 833

   UBQ; Ubiquitin-like proteins

8. XM_001101236.4 → XP_001101236.2  rap guanine nucleotide exchange factor 6 isoform X2

   UniProtKB/TrEMBL

   H9ZA13

   Related

   ENSMMUP00000067284.1, ENSMMUT00000086035.1

   Conserved Domains (7) summary

   smart00229
   Location:412 → 525

   RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif

   COG0664
   Location:274 → 448

   Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]

   cd00038
   Location:280 → 380

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cd00155
   Location:857 → 1081

   RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

   cd00992
   Location:529 → 609

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl00047
   Location:37 → 82

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cl00155
   Location:749 → 833

   UBQ; Ubiquitin-like proteins

9. XM_001100970.4 → XP_001100970.1  rap guanine nucleotide exchange factor 6 isoform X7

   See identical proteins and their annotated locations for XP_001100970.1

   UniProtKB/TrEMBL

   F7HR15, H9F7F1

   Related

   ENSMMUP00000008112.3, ENSMMUT00000008630.4

   Conserved Domains (7) summary

   smart00229
   Location:412 → 525

   RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif

   COG0664
   Location:274 → 448

   Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]

   cd00038
   Location:280 → 380

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cd00155
   Location:862 → 1086

   RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

   cd00992
   Location:529 → 609

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   cl00047
   Location:37 → 82

   CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

   cl00155
   Location:754 → 838

   UBQ; Ubiquitin-like proteins

10. XM_001100863.4 → XP_001100863.1  rap guanine nucleotide exchange factor 6 isoform X11

    See identical proteins and their annotated locations for XP_001100863.1

    UniProtKB/TrEMBL

    H9F7F1

    Conserved Domains (6) summary

    smart00229
    Location:412 → 525

    RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif

    cd00038
    Location:280 → 380

    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

    cd00155
    Location:857 → 1067

    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

    cd00992
    Location:529 → 609

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    cl00047
    Location:37 → 82

    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

    cl00155
    Location:749 → 833

    UBQ; Ubiquitin-like proteins

11. XM_015140712.2 → XP_014996198.1  rap guanine nucleotide exchange factor 6 isoform X10

    UniProtKB/TrEMBL

    H9F7F1

    Conserved Domains (6) summary

    smart00229
    Location:412 → 525

    RasGEFN; Guanine nucleotide exchange factor for Ras-like GTPases; N-terminal motif

    cd00038
    Location:280 → 380

    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

    cd00155
    Location:857 → 1081

    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...

    cd00992
    Location:529 → 609

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    cl00047
    Location:37 → 82

    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

    cl00155
    Location:749 → 833

    UBQ; Ubiquitin-like proteins