U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714274, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CDK5R1provided by VGNC
    Official Full Name
    cyclin dependent kinase 5 regulatory subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:70981
    Locus tag
    EGK_08383
    See related
    Ensembl:ENSMMUG00000009548
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CDK5R1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (28893559..28897763)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (26494007..26498181)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene nucleotide triphosphate diphosphatase NUDT15 pseudogene Neighboring gene proteasome 26S subunit, non-ATPase 11 Neighboring gene cytosolic iron-sulfur assembly component 2A pseudogene Neighboring gene myosin ID Neighboring gene basic salivary proline-rich protein 1-like Neighboring gene uncharacterized LOC106993955

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cyclin-dependent protein serine/threonine kinase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cyclin-dependent protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of protein kinase 5 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cyclin-dependent kinase 5 activator 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257715.1 → NP_001244644.1  cyclin-dependent kinase 5 activator 1

      See identical proteins and their annotated locations for NP_001244644.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320030
      UniProtKB/TrEMBL
      A0A8J8XGA9, F6Y8D3, G7NGU6, H9EYQ1
      Related
      ENSMMUP00000012484.2, ENSMMUT00000013324.4
      Conserved Domains (1) summary
      pfam03261
      Location:34 → 290
      CDK5_activator; Cyclin-dependent kinase 5 activator protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      28893559..28897763
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015119027.2 → XP_014974513.1  cyclin-dependent kinase 5 activator 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XGA9, F6Y8D3, G7NGU6, H9EYQ1
      Conserved Domains (1) summary
      pfam03261
      Location:34 → 290
      CDK5_activator; Cyclin-dependent kinase 5 activator protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.