U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    UHRF1 ubiquitin like with PHD and ring finger domains 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695531, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    UHRF1provided by VGNC
    Official Full Name
    ubiquitin like with PHD and ring finger domains 1provided by VGNC
    Primary source
    VGNC:VGNC:78713
    See related
    Ensembl:ENSMMUG00000012705
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See UHRF1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (4841449..4898337)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (5063136..5119093)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994613 Neighboring gene perilipin 3 Neighboring gene arrestin domain containing 5 Neighboring gene lysine demethylase 4B Neighboring gene translation initiation factor IF-2-like Neighboring gene protein tyrosine phosphatase receptor type S Neighboring gene 60S ribosomal protein L32 pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of gene expression via chromosomal CpG island methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    E3 ubiquitin-protein ligase UHRF1
    XP_001082762.1
    XP_001083134.2
    XP_014978040.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      4841449..4898337
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001083134.4 → XP_001083134.2  E3 ubiquitin-protein ligase UHRF1 isoform X1

      Conserved Domains (6) summary
      cd01797
      Location:65 → 142
      NIRF_N; amino-terminal ubiquitin-like domain of Np95 and NIRF
      smart00213
      Location:67 → 138
      UBQ; Ubiquitin homologues
      cd00162
      Location:790 → 832
      RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
      cd15616
      Location:383 → 429
      PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
      pfam02182
      Location:483 → 650
      SAD_SRA; SAD/SRA domain
      pfam12148
      Location:197 → 350
      TTD; Tandem tudor domain within UHRF1

    2. XM_001082762.4 → XP_001082762.1  E3 ubiquitin-protein ligase UHRF1 isoform X2

      See identical proteins and their annotated locations for XP_001082762.1

      UniProtKB/TrEMBL
      A0A1D5Q791, F7DWN1
      Related
      ENSMMUP00000016682.2, ENSMMUT00000017814.4
      Conserved Domains (6) summary
      cd01797
      Location:1 → 78
      NIRF_N; amino-terminal ubiquitin-like domain of Np95 and NIRF
      smart00213
      Location:3 → 74
      UBQ; Ubiquitin homologues
      cd00162
      Location:726 → 768
      RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
      cd15616
      Location:319 → 365
      PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
      pfam02182
      Location:419 → 586
      SAD_SRA; SAD/SRA domain
      pfam12148
      Location:133 → 286
      TTD; Tandem tudor domain within UHRF1

    3. XM_015122554.2 → XP_014978040.1  E3 ubiquitin-protein ligase UHRF1 isoform X3

      Conserved Domains (5) summary
      cd00162
      Location:679 → 721
      RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
      cd15616
      Location:272 → 318
      PHD_UHRF1; PHD finger found in ubiquitin-like PHD and RING finger domain-containing protein 1 (UHRF1)
      pfam02182
      Location:372 → 539
      SAD_SRA; SAD/SRA domain
      pfam12148
      Location:86 → 239
      TTD; Tandem tudor domain within UHRF1
      cl00155
      Location:4 → 31
      UBQ; Ubiquitin-like proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials