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    PTP4A3 protein tyrosine phosphatase 4A3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693703, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PTP4A3provided by VGNC
    Official Full Name
    protein tyrosine phosphatase 4A3provided by VGNC
    Primary source
    VGNC:VGNC:76596
    Locus tag
    EGK_21284
    See related
    Ensembl:ENSMMUG00000019392
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PTP4A3 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (141628336..141672158)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (140629559..140674349)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 45 member 4 Neighboring gene SLC45A4 antisense RNA 1 Neighboring gene G protein-coupled receptor 20 Neighboring gene uncharacterized LOC106999970 Neighboring gene small nucleolar RNA SNORD5 Neighboring gene maestro heat like repeat family member 5 Neighboring gene uncharacterized LOC114680130

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endothelial cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein tyrosine phosphatase type IVA 3
    Names
    protein tyrosine phosphatase type IVA, member 3
    NP_001180623.1
    XP_015001567.1
    XP_015001569.1
    XP_015001570.1
    XP_015001571.1
    XP_028707947.1
    XP_028707948.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193694.2 → NP_001180623.1  protein tyrosine phosphatase type IVA 3

      See identical proteins and their annotated locations for NP_001180623.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000453
      UniProtKB/TrEMBL
      F6T1U3, G8F1I3
      Conserved Domains (1) summary
      cd18535
      Location:5 → 158
      PTP-IVa3; protein tyrosine phosphatase type IVA 3

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      141628336..141672158
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015146084.2 → XP_015001570.1  protein tyrosine phosphatase type IVA 3 isoform X1

      UniProtKB/TrEMBL
      F6T1U3, G8F1I3
      Related
      ENSMMUP00000063220.1, ENSMMUT00000106330.1
      Conserved Domains (1) summary
      cd18535
      Location:5 → 158
      PTP-IVa3; protein tyrosine phosphatase type IVA 3

    2. XM_028852114.1 → XP_028707947.1  protein tyrosine phosphatase type IVA 3 isoform X1

      UniProtKB/TrEMBL
      F6T1U3, G8F1I3
      Conserved Domains (1) summary
      cd18535
      Location:5 → 158
      PTP-IVa3; protein tyrosine phosphatase type IVA 3

    3. XM_015146083.2 → XP_015001569.1  protein tyrosine phosphatase type IVA 3 isoform X1

      UniProtKB/TrEMBL
      F6T1U3, G8F1I3
      Conserved Domains (1) summary
      cd18535
      Location:5 → 158
      PTP-IVa3; protein tyrosine phosphatase type IVA 3

    4. XM_015146081.2 → XP_015001567.1  protein tyrosine phosphatase type IVA 3 isoform X1

      UniProtKB/TrEMBL
      F6T1U3, G8F1I3
      Related
      ENSMMUP00000042913.1, ENSMMUT00000059944.2
      Conserved Domains (1) summary
      cd18535
      Location:5 → 158
      PTP-IVa3; protein tyrosine phosphatase type IVA 3

    5. XM_015146085.2 → XP_015001571.1  protein tyrosine phosphatase type IVA 3 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QJX9
      Related
      ENSMMUP00000048352.1, ENSMMUT00000061827.2
      Conserved Domains (1) summary
      cl28904
      Location:5 → 133
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

    6. XM_028852115.1 → XP_028707948.1  protein tyrosine phosphatase type IVA 3 isoform X3

      Conserved Domains (1) summary
      cl28904
      Location:1 → 125
      PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
    Nucleotide Protein
    Heading Accession and Version

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