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    OTOS otospiralin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698202, updated on 17-Aug-2024

    Summary

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    Official Symbol
    OTOSprovided by VGNC
    Official Full Name
    otospiralinprovided by VGNC
    Primary source
    VGNC:VGNC:104547
    Locus tag
    EGK_04973
    See related
    Ensembl:ENSMMUG00000056837
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See OTOS in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (127518588..127520577, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (122855010..122857068, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 6B3 Neighboring gene uncharacterized LOC114671460 Neighboring gene COP9 signalosome subunit 9 Neighboring gene uncharacterized LOC106992790 Neighboring gene small nucleolar RNA U3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in sensory perception of sound IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    otospiralin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260881.1 → NP_001247810.1  otospiralin precursor

      See identical proteins and their annotated locations for NP_001247810.1

      Status: PROVISIONAL

      Source sequence(s)
      JU322652
      UniProtKB/TrEMBL
      A0A5F7ZIX5, A0A8J8XY52, F6U7M5
      Related
      ENSMMUP00000065576.1, ENSMMUT00000097066.1
      Conserved Domains (1) summary
      pfam15182
      Location:21 → 89
      OTOS; Otospiralin

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      127518588..127520577 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111494.2 → XP_014966980.1  otospiralin isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZIX5, A0A8J8XY52, F6U7M5
      Conserved Domains (1) summary
      pfam15182
      Location:21 → 89
      OTOS; Otospiralin
    Nucleotide Protein
    Heading Accession and Version

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