U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ZC3H12C zinc finger CCCH-type containing 12C [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708921, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ZC3H12Cprovided by VGNC
    Official Full Name
    zinc finger CCCH-type containing 12Cprovided by VGNC
    Primary source
    VGNC:VGNC:101427
    Locus tag
    EGK_06871
    See related
    Ensembl:ENSMMUG00000048435
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ZC3H12C in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (103274780..103352431)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (102996516..103074692)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein SA pseudogene Neighboring gene DNA-directed RNA polymerases I, II, and III subunit RPABC1 pseudogene Neighboring gene radixin Neighboring gene ferredoxin 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic ribonucleoprotein granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    probable ribonuclease ZC3H12C
    Names
    putative ribonuclease ZC3H12C

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      103274780..103352431
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015115628.2 → XP_014971114.2  probable ribonuclease ZC3H12C isoform X1

      UniProtKB/TrEMBL
      A0A1D5QMP2, H9F5R6
      Related
      ENSMMUP00000049317.2, ENSMMUT00000054896.2
      Conserved Domains (2) summary
      cl25932
      Location:533 → 743
      Peptidase_S21; Assemblin (Peptidase family S21)
      cd18729
      Location:249 → 379
      PIN_Zc3h12-like; PRORP-like PIN domain of ribonuclease Zc3h12a and related proteins

    2. XM_015115630.2 → XP_014971116.2  probable ribonuclease ZC3H12C isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q7F4, H9F5R6
      Related
      ENSMMUP00000043970.2, ENSMMUT00000068682.2
      Conserved Domains (2) summary
      cl25932
      Location:532 → 742
      Peptidase_S21; Assemblin (Peptidase family S21)
      cd18729
      Location:248 → 378
      PIN_Zc3h12-like; PRORP-like PIN domain of ribonuclease Zc3h12a and related proteins

    3. XM_001104883.4 → XP_001104883.4  probable ribonuclease ZC3H12C isoform X2

      UniProtKB/TrEMBL
      A0A5F8AR74, H9F5R6
      Related
      ENSMMUP00000079567.1, ENSMMUT00000087293.1
      Conserved Domains (2) summary
      cl25932
      Location:533 → 743
      Peptidase_S21; Assemblin (Peptidase family S21)
      cd18729
      Location:249 → 379
      PIN_Zc3h12-like; PRORP-like PIN domain of ribonuclease Zc3h12a and related proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.