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    RANBP2 RAN binding protein 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694823, updated on 16-Aug-2024

    Summary

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    Official Symbol
    RANBP2provided by VGNC
    Official Full Name
    RAN binding protein 2provided by VGNC
    Primary source
    VGNC:VGNC:106205
    See related
    Ensembl:ENSMMUG00000021019
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RANBP2 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (12394555..12466430)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (104293974..104368085)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 7B, mitochondrial pseudogene Neighboring gene 60S ribosomal protein L10-like Neighboring gene uncharacterized LOC114671902 Neighboring gene coiled-coil domain containing 138 Neighboring gene ectodysplasin A receptor Neighboring gene uncharacterized LOC114671821

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in NLS-bearing protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein peptidyl-prolyl isomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 SUMO-protein ligase RanBP2
    Names
    e3 SUMO-protein ligase RanBP2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      12394555..12466430
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015113092.2 → XP_014968578.2  E3 SUMO-protein ligase RanBP2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QCJ9, G7NAW0
      Related
      ENSMMUP00000045768.2, ENSMMUT00000077854.2
      Conserved Domains (11) summary
      COG0457
      Location:18 → 126
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd01926
      Location:3087 → 3245
      cyclophilin_ABH_like; Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding ...
      cd13177
      Location:2027 → 2143
      RanBD2_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 2
      cd13178
      Location:2951 → 3067
      RanBD4_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 4
      cd14684
      Location:1186 → 1302
      RanBD1_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 1
      cd14685
      Location:2324 → 2440
      RanBD3_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 3
      sd00025
      Location:1419 → 1438
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      sd00006
      Location:59 → 89
      TPR; TPR repeat [structural motif]
      pfam00641
      Location:1606 → 1635
      zf-RanBP; Zn-finger in Ran binding protein and others
      pfam03154
      Location:747 → 1095
      Atrophin-1; Atrophin-1 family
      pfam12185
      Location:2735 → 2794
      IR1-M; Nup358/RanBP2 E3 ligase domain

    2. XM_015113094.2 → XP_014968580.2  E3 SUMO-protein ligase RanBP2 isoform X2

      UniProtKB/TrEMBL
      F7HI99, G7NAW0
      Related
      ENSMMUP00000027658.4, ENSMMUT00000029557.4
      Conserved Domains (11) summary
      COG0457
      Location:18 → 126
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd01926
      Location:3061 → 3219
      cyclophilin_ABH_like; Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which accelerates protein folding ...
      cd13177
      Location:2027 → 2143
      RanBD2_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 2
      cd13178
      Location:2925 → 3041
      RanBD4_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 4
      cd14684
      Location:1186 → 1302
      RanBD1_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 1
      cd14685
      Location:2324 → 2440
      RanBD3_RanBP2-like; Ran-binding protein 2, Ran binding domain repeat 3
      sd00025
      Location:1419 → 1438
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      sd00006
      Location:59 → 89
      TPR; TPR repeat [structural motif]
      pfam00641
      Location:1606 → 1635
      zf-RanBP; Zn-finger in Ran binding protein and others
      pfam03154
      Location:747 → 1095
      Atrophin-1; Atrophin-1 family
      pfam12185
      Location:2709 → 2768
      IR1-M; Nup358/RanBP2 E3 ligase domain
    Nucleotide Protein
    Heading Accession and Version

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