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    NABP1 nucleic acid binding protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694172, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NABP1provided by VGNC
    Official Full Name
    nucleic acid binding protein 1provided by VGNC
    Primary source
    VGNC:VGNC:75025
    Locus tag
    EGK_04635
    See related
    Ensembl:ENSMMUG00000009460
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    OBFC2A
    Orthologs
    human mouse all
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    Genomic context

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    See NABP1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (78910185..78923998)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (79308466..79322290)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106992676 Neighboring gene uncharacterized LOC114671382 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106992678 Neighboring gene caveolae associated protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to ionizing radiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SOSS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SOSS complex subunit B2
    Names
    oligonucleotide/oligosaccharide-binding fold containing 2A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261728.1 → NP_001248657.1  SOSS complex subunit B2

      See identical proteins and their annotated locations for NP_001248657.1

      Status: PROVISIONAL

      Source sequence(s)
      JV044207
      UniProtKB/TrEMBL
      A0A5F8A2U2, A0A8J8Y1A5, F7A9D1, G7N8J1
      Related
      ENSMMUP00000012371.3, ENSMMUT00000013200.4
      Conserved Domains (1) summary
      cd04491
      Location:22 → 99
      SoSSB_OBF; SoSSB_OBF: A subfamily of OB folds similar to the OB fold of the crenarchaeote Sulfolobus solfataricus single-stranded (ss) DNA-binding protein (SSoSSB). SSoSSB has a single OB fold, and it physically and functionally interacts with RNA polymerase. In ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      78910185..78923998
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015110575.2 → XP_014966061.1  SOSS complex subunit B2 isoform X2

    2. XM_015110573.2 → XP_014966059.1  SOSS complex subunit B2 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A2U2, A0A8J8Y1A5, F7A9D1, G7N8J1
      Related
      ENSMMUP00000071216.1, ENSMMUT00000086455.1
      Conserved Domains (1) summary
      cd04491
      Location:22 → 99
      SoSSB_OBF; SoSSB_OBF: A subfamily of OB folds similar to the OB fold of the crenarchaeote Sulfolobus solfataricus single-stranded (ss) DNA-binding protein (SSoSSB). SSoSSB has a single OB fold, and it physically and functionally interacts with RNA polymerase. In ...

    RNA

    1. XR_003721142.1 RNA Sequence

    2. XR_003721143.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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