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    GTF3C4 general transcription factor IIIC subunit 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714849, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GTF3C4provided by VGNC
    Official Full Name
    general transcription factor IIIC subunit 4provided by VGNC
    Primary source
    VGNC:VGNC:73318
    See related
    Ensembl:ENSMMUG00000009915
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GTF3C4 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (7686410..7707200, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (5780237..5801017, complement)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene TSC complex subunit 1 Neighboring gene sperm acrosome associated 9 Neighboring gene adenylate kinase 8 Neighboring gene uncharacterized LOC114672710 Neighboring gene DEAD-box helicase 31 Neighboring gene BarH like homeobox 1 Neighboring gene cilia and flagella associated protein 77

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone acetyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription initiation at RNA polymerase III promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIIIC complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    general transcription factor 3C polypeptide 4
    Names
    general transcription factor IIIC, polypeptide 4, 90kDa
    NP_001247902.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260973.1 → NP_001247902.1  general transcription factor 3C polypeptide 4

      See identical proteins and their annotated locations for NP_001247902.1

      Status: PROVISIONAL

      Source sequence(s)
      JU477867
      UniProtKB/TrEMBL
      H9F9Q0, H9ZFF5
      Related
      ENSMMUP00000062565.1, ENSMMUT00000080732.1
      Conserved Domains (2) summary
      pfam12657
      Location:66 → 255
      TFIIIC_delta; Transcription factor IIIC subunit delta N-term
      pfam12660
      Location:746 → 818
      zf-TFIIIC; Putative zinc-finger of transcription factor IIIC complex

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      7686410..7707200 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials