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    GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697929, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GGA1provided by VGNC
    Official Full Name
    golgi associated, gamma adaptin ear containing, ARF binding protein 1provided by VGNC
    Primary source
    VGNC:VGNC:72737
    Locus tag
    EGK_03019
    See related
    Ensembl:ENSMMUG00000003853
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GGA1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (13925443..13952268, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (79593910..79621116)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene nucleolar protein 12 Neighboring gene SH3 domain binding protein 1 Neighboring gene galectin 2 Neighboring gene CDC42 effector protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor-binding protein GGA1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      13925443..13952268 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028827738.1 → XP_028683571.1  ADP-ribosylation factor-binding protein GGA1 isoform X2

      UniProtKB/TrEMBL
      F7HAB9
      Conserved Domains (3) summary
      smart00809
      Location:513 → 627
      Alpha_adaptinC2; Adaptin C-terminal domain
      cd14239
      Location:210 → 299
      GAT_GGA1_GGA2; GAT domain found in ADP-ribosylation factor (Arf)-binding proteins GGA1 and GGA2
      cd17009
      Location:9 → 147
      VHS_GGA1; VHS (Vps27/Hrs/STAM) domain of ADP-ribosylation factor-binding protein GGA1

    2. XM_015150291.2 → XP_015005777.1  ADP-ribosylation factor-binding protein GGA1 isoform X1

      UniProtKB/TrEMBL
      F6QTW0, F7HAB9, H9FSR6
      Related
      ENSMMUP00000037025.3, ENSMMUT00000044021.3
      Conserved Domains (4) summary
      smart00809
      Location:517 → 631
      Alpha_adaptinC2; Adaptin C-terminal domain
      cd03567
      Location:9 → 147
      VHS_GGA; VHS domain family, GGA subfamily; GGA (Golgi-localized, Gamma-ear-containing, Arf-binding) comprise a subfamily of ubiquitously expressed, monomeric, motif-binding cargo/clathrin adaptor proteins. The VHS domain has a superhelical structure similar to ...
      cd14239
      Location:210 → 299
      GAT_GGA1_GGA2; GAT domain found in ADP-ribosylation factor (Arf)-binding proteins GGA1 and GGA2
      cl00753
      Location:180 → 234
      DUF327; Protein of unknown function (DUF327)

    3. XM_028827739.1 → XP_028683572.1  ADP-ribosylation factor-binding protein GGA1 isoform X3

      UniProtKB/TrEMBL
      F7HAB9
      Conserved Domains (3) summary
      smart00809
      Location:444 → 558
      Alpha_adaptinC2; Adaptin C-terminal domain
      cd14239
      Location:137 → 226
      GAT_GGA1_GGA2; GAT domain found in ADP-ribosylation factor (Arf)-binding proteins GGA1 and GGA2
      cl02544
      Location:1 → 74
      VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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