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    SF3B2 splicing factor 3b subunit 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714747, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SF3B2provided by VGNC
    Official Full Name
    splicing factor 3b subunit 2provided by VGNC
    Primary source
    VGNC:VGNC:77180
    See related
    Ensembl:ENSMMUG00000011743
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SF3B2 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (8478598..8496217, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (8361043..8372383, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106993189 Neighboring gene kinesin light chain 2 Neighboring gene phosphofurin acidic cluster sorting protein 1 Neighboring gene small nucleolar RNA U13 Neighboring gene small nucleolar RNA U13 Neighboring gene eukaryotic initiation factor 4A-I-like Neighboring gene galactose-3-O-sulfotransferase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U12-type spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2-type spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    splicing factor 3B subunit 2
    Names
    splicing factor 3b, subunit 2, 145kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      8478598..8496217 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833216.1 → XP_028689049.1  splicing factor 3B subunit 2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RBL4, A0A5S6R7A4, A0A8J8YNU3, F7GWY2, G7NC70
      Related
      ENSMMUP00000015408.4, ENSMMUT00000016447.4
      Conserved Domains (3) summary
      COG5182
      Location:442 → 706
      CUS1; Splicing factor 3b, subunit 2 [RNA processing and modification]
      pfam04037
      Location:471 → 596
      DUF382; Domain of unknown function (DUF382)
      pfam02037
      Location:30 → 57
      SAP; SAP domain

    2. XM_028833219.1 → XP_028689052.1  splicing factor 3B subunit 2 isoform X4

      UniProtKB/TrEMBL
      A0A1D5RBL4
      Conserved Domains (3) summary
      COG5182
      Location:440 → 704
      CUS1; Splicing factor 3b, subunit 2 [RNA processing and modification]
      pfam04037
      Location:469 → 594
      DUF382; Domain of unknown function (DUF382)
      pfam02037
      Location:30 → 57
      SAP; SAP domain

    3. XM_028833218.1 → XP_028689051.1  splicing factor 3B subunit 2 isoform X3

      UniProtKB/TrEMBL
      A0A1D5RBL4
      Conserved Domains (3) summary
      COG5182
      Location:441 → 705
      CUS1; Splicing factor 3b, subunit 2 [RNA processing and modification]
      pfam04037
      Location:470 → 595
      DUF382; Domain of unknown function (DUF382)
      pfam02037
      Location:30 → 57
      SAP; SAP domain

    4. XM_028833217.1 → XP_028689050.1  splicing factor 3B subunit 2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5RBL4
      Conserved Domains (3) summary
      COG5182
      Location:441 → 705
      CUS1; Splicing factor 3b, subunit 2 [RNA processing and modification]
      pfam04037
      Location:470 → 595
      DUF382; Domain of unknown function (DUF382)
      pfam02037
      Location:30 → 57
      SAP; SAP domain
    Nucleotide Protein
    Heading Accession and Version

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