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    HMGA2 high mobility group AT-hook 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717721, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HMGA2provided by VGNC
    Official Full Name
    high mobility group AT-hook 2provided by VGNC
    Primary source
    VGNC:VGNC:82157
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HMGA2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (65405788..65545528)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (64604463..64745037)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene PEST proteolytic signal-containing nuclear protein pseudogene Neighboring gene 40S ribosomal protein SA-like Neighboring gene uncharacterized LOC114670885 Neighboring gene uncharacterized LOC114670886 Neighboring gene uncharacterized LOC107000917 Neighboring gene uncharacterized LOC114670884

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high mobility group protein HMGI-C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      65405788..65545528
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001117025.4 → XP_001117025.1  high mobility group protein HMGI-C isoform X1

      See identical proteins and their annotated locations for XP_001117025.1

      UniProtKB/TrEMBL
      A0A1D5QQP6
      Conserved Domains (1) summary
      cl39058
      Location:3 → 75
      RNB; RNB domain

    2. XM_002798668.3 → XP_002798714.1  high mobility group protein HMGI-C isoform X2

      See identical proteins and their annotated locations for XP_002798714.1

      UniProtKB/TrEMBL
      A0A1D5QFK3
      Conserved Domains (1) summary
      cl39058
      Location:3 → 75
      RNB; RNB domain

    3. XM_015152210.2 → XP_015007696.1  high mobility group protein HMGI-C isoform X3

      Conserved Domains (1) summary
      TIGR02102
      Location:14 → 99
      pullulan_Gpos; pullulanase, extracellular, Gram-positive
    Nucleotide Protein
    Heading Accession and Version

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