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    RBAK RB associated KRAB zinc finger [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716026, updated on 5-Mar-2024

    Summary

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    Gene symbol
    RBAK
    Gene description
    RB associated KRAB zinc finger
    See related
    Ensembl:ENSMMUG00000039501
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RBAK in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (38140140..38184215)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (39121258..39144878)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene monocyte to macrophage differentiation associated 2 Neighboring gene E3 ubiquitin-protein ligase RNF216-like Neighboring gene E3 ubiquitin-protein ligase RNF216-like Neighboring gene putative speedy protein E7 Neighboring gene uncharacterized LOC100430902 Neighboring gene WD repeat domain, phosphoinositide interacting 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RB-associated KRAB zinc finger protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      38140140..38184215
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015133221.2 → XP_014988707.2  RB-associated KRAB zinc finger protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5QTH3
      Related
      ENSMMUP00000064207.1, ENSMMUT00000091426.1
      Conserved Domains (4) summary
      smart00349
      Location:8 → 68
      KRAB; krueppel associated box
      COG5048
      Location:343 → 702
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:319 → 339
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:317 → 339
      zf-C2H2; Zinc finger, C2H2 type

    2. XM_028845078.1 → XP_028700911.1  RB-associated KRAB zinc finger protein isoform X2

      Conserved Domains (4) summary
      COG5048
      Location:311 → 670
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:287 → 307
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:285 → 307
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:7 → 47
      KRAB; KRAB box

    3. XM_015133220.2 → XP_014988706.2  RB-associated KRAB zinc finger protein isoform X1

      UniProtKB/TrEMBL
      A0A1D5QTH3
      Related
      ENSMMUP00000051352.2, ENSMMUT00000053530.2
      Conserved Domains (4) summary
      smart00349
      Location:8 → 68
      KRAB; krueppel associated box
      COG5048
      Location:343 → 702
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:319 → 339
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:317 → 339
      zf-C2H2; Zinc finger, C2H2 type
    Nucleotide Protein
    Heading Accession and Version

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