These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001260563.1 → NP_001247492.1  cochlin precursor

   See identical proteins and their annotated locations for NP_001247492.1

   Status: PROVISIONAL

   Source sequence(s)

   JV043954

   UniProtKB/TrEMBL

   A0A8J8XE18, F6XMW4, F6XMZ4, F7C5Y0, G7MXE4

   Related

   ENSMMUP00000033007.3, ENSMMUT00000039945.3

   Conserved Domains (3) summary

   smart00603
   Location:30 → 112

   LCCL; LCCL domain

   cd01472
   Location:366 → 527

   vWA_collagen; von Willebrand factor (vWF) type A domain; equivalent to the I-domain of integrins. This domain has a variety of functions including: intermolecular adhesion, cell migration, signalling, transcription, and DNA repair. In integrins these domains form ...

   cd01482
   Location:164 → 328

   vWA_collagen_alphaI-XII-like; Collagen: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different ...

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference Mmul_10 Primary Assembly

Genomic

1. NC_041760.1 Reference Mmul_10 Primary Assembly

   Range

   92960907..92977901

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_015143480.2 → XP_014998966.1  cochlin isoform X1

   UniProtKB/TrEMBL

   A0A8J8XE18, F6XMW4, F6XMZ4, F7C5Y0, G7MXE4

   Related

   ENSMMUP00000033006.2, ENSMMUT00000039944.3

   Conserved Domains (3) summary

   smart00603
   Location:30 → 112

   LCCL; LCCL domain

   cd01472
   Location:366 → 527

   vWA_collagen; von Willebrand factor (vWF) type A domain; equivalent to the I-domain of integrins. This domain has a variety of functions including: intermolecular adhesion, cell migration, signalling, transcription, and DNA repair. In integrins these domains form ...

   cd01482
   Location:164 → 328

   vWA_collagen_alphaI-XII-like; Collagen: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different ...