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    RBM47 RNA binding motif protein 47 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700732, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RBM47provided by VGNC
    Official Full Name
    RNA binding motif protein 47provided by VGNC
    Primary source
    VGNC:VGNC:76576
    Locus tag
    EGK_15671
    See related
    Ensembl:ENSMMUG00000012036
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RBM47 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (39580725..39787837, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (40183094..40393551, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene cholinergic receptor nicotinic alpha 9 subunit Neighboring gene U7 small nuclear RNA Neighboring gene 60S ribosomal protein L37 pseudogene Neighboring gene 60S ribosomal protein L4 pseudogene Neighboring gene RNA-binding protein PNO1 Neighboring gene NOP2/Sun RNA methyltransferase family member 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 47

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      39580725..39787837 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001095351.4 → XP_001095351.1  RNA-binding protein 47 isoform X1

      See identical proteins and their annotated locations for XP_001095351.1

      UniProtKB/TrEMBL
      A0A5F8AS32, A0A8J8Y7I0, G7MST1
      Related
      ENSMMUP00000080209.1, ENSMMUT00000106174.1
      Conserved Domains (1) summary
      TIGR01648
      Location:21 → 593
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    2. XM_001094904.4 → XP_001094904.1  RNA-binding protein 47 isoform X3

      See identical proteins and their annotated locations for XP_001094904.1

      Conserved Domains (1) summary
      TIGR01648
      Location:21 → 524
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    3. XM_001095125.4 → XP_001095125.1  RNA-binding protein 47 isoform X1

      See identical proteins and their annotated locations for XP_001095125.1

      UniProtKB/TrEMBL
      A0A5F8AS32, A0A8J8Y7I0, G7MST1
      Conserved Domains (1) summary
      TIGR01648
      Location:21 → 593
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    4. XM_028848403.1 → XP_028704236.1  RNA-binding protein 47 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AS32, A0A8J8Y7I0, G7MST1
      Conserved Domains (1) summary
      TIGR01648
      Location:21 → 593
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    5. XM_028848404.1 → XP_028704237.1  RNA-binding protein 47 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AS32, A0A8J8Y7I0, G7MST1
      Conserved Domains (1) summary
      TIGR01648
      Location:21 → 593
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    6. XM_015138227.2 → XP_014993713.1  RNA-binding protein 47 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AS32, A0A8J8Y7I0, G7MST1
      Conserved Domains (1) summary
      TIGR01648
      Location:21 → 593
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    7. XM_015138228.2 → XP_014993714.1  RNA-binding protein 47 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AS32, A0A8J8Y7I0, G7MST1
      Conserved Domains (1) summary
      TIGR01648
      Location:21 → 593
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    8. XM_028848405.1 → XP_028704238.1  RNA-binding protein 47 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AS32, A0A8J8Y7I0, G7MST1
      Conserved Domains (1) summary
      TIGR01648
      Location:21 → 593
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    9. XM_015138229.2 → XP_014993715.1  RNA-binding protein 47 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AS32, A0A8J8Y7I0, G7MST1
      Conserved Domains (1) summary
      TIGR01648
      Location:21 → 593
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

    10. XM_028848406.1 → XP_028704239.1  RNA-binding protein 47 isoform X2

      UniProtKB/TrEMBL
      F7F3H5, F7GWI0, F7GWI1
      Related
      ENSMMUP00000015789.3, ENSMMUT00000016859.4
      Conserved Domains (1) summary
      TIGR01648
      Location:21 → 592
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    Nucleotide Protein
    Heading Accession and Version

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