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    RUFY3 RUN and FYVE domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706417, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RUFY3provided by VGNC
    Official Full Name
    RUN and FYVE domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:77128
    See related
    Ensembl:ENSMMUG00000004465
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RUFY3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (62967098..63069336, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (63809767..63915907, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678331 Neighboring gene G-rich RNA sequence binding factor 1 Neighboring gene small nucleolar RNA U13 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of axonogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein RUFY3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      62967098..63069336 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028848524.1 → XP_028704357.1  protein RUFY3 isoform X5

      UniProtKB/TrEMBL
      A0A5F7ZPP4
      Related
      ENSMMUP00000067151.1, ENSMMUT00000090765.1
      Conserved Domains (3) summary
      PHA03247
      Location:5 → 100
      PHA03247; large tegument protein UL36; Provisional
      TIGR02168
      Location:314 → 598
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:163 → 284
      RUN; RUN domain

    2. XM_028848522.1 → XP_028704355.1  protein RUFY3 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZPP4, F7GLB1
      Related
      ENSMMUP00000005949.4, ENSMMUT00000006325.4
      Conserved Domains (4) summary
      PHA03247
      Location:5 → 100
      PHA03247; large tegument protein UL36; Provisional
      TIGR02168
      Location:314 → 598
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:611 → 645
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:163 → 284
      RUN; RUN domain

    3. XM_015138567.2 → XP_014994053.1  protein RUFY3 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZPP4, A0A5F8ASA4
      Related
      ENSMMUP00000079785.1, ENSMMUT00000095951.1
      Conserved Domains (4) summary
      cd15744
      Location:622 → 668
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam01442
      Location:334 → 507
      Apolipoprotein; Apolipoprotein A1/A4/E domain
      pfam02759
      Location:163 → 286
      RUN; RUN domain
      pfam15960
      Location:402 → 558
      DUF4763; Domain of unknown function (DUF4763)

    4. XM_015138569.2 → XP_014994055.1  protein RUFY3 isoform X7

      UniProtKB/TrEMBL
      F6WRZ0, G7MT49, H9Z6I6
      Related
      ENSMMUP00000035103.3, ENSMMUT00000042105.3
      Conserved Domains (3) summary
      cd15744
      Location:562 → 608
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam01442
      Location:274 → 447
      Apolipoprotein; Apolipoprotein A1/A4/E domain
      pfam02759
      Location:103 → 226
      RUN; RUN domain

    5. XM_028848527.1 → XP_028704360.1  protein RUFY3 isoform X8

      UniProtKB/TrEMBL
      A0A5F7ZPP4
      Conserved Domains (3) summary
      PHA03247
      Location:5 → 100
      PHA03247; large tegument protein UL36; Provisional
      TIGR02168
      Location:314 → 567
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:163 → 284
      RUN; RUN domain

    6. XM_028848521.1 → XP_028704354.1  protein RUFY3 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZPP4
      Conserved Domains (3) summary
      PHA03247
      Location:5 → 100
      PHA03247; large tegument protein UL36; Provisional
      TIGR02168
      Location:314 → 598
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:163 → 284
      RUN; RUN domain

    7. XM_028848520.1 → XP_028704353.1  protein RUFY3 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZPP4
      Conserved Domains (3) summary
      PHA03247
      Location:5 → 100
      PHA03247; large tegument protein UL36; Provisional
      TIGR02168
      Location:314 → 598
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:163 → 284
      RUN; RUN domain

    8. XM_028848523.1 → XP_028704356.1  protein RUFY3 isoform X4

      UniProtKB/TrEMBL
      G7MT49
      Conserved Domains (2) summary
      TIGR02168
      Location:272 → 556
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:121 → 242
      RUN; RUN domain

    9. XM_028848525.1 → XP_028704358.1  protein RUFY3 isoform X6

      UniProtKB/TrEMBL
      G7MT49
      Conserved Domains (2) summary
      TIGR02168
      Location:254 → 538
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:103 → 224
      RUN; RUN domain

    10. XM_028848529.1 → XP_028704362.1  protein RUFY3 isoform X10

      UniProtKB/TrEMBL
      A0A1D5QVE9
      Conserved Domains (2) summary
      TIGR02168
      Location:190 → 474
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:39 → 160
      RUN; RUN domain

    11. XM_028848528.1 → XP_028704361.1  protein RUFY3 isoform X9

      UniProtKB/TrEMBL
      A0A1D5QVE9
      Conserved Domains (2) summary
      TIGR02168
      Location:201 → 485
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:50 → 171
      RUN; RUN domain

    12. XM_028848526.1 → XP_028704359.1  protein RUFY3 isoform X8

      UniProtKB/TrEMBL
      A0A5F7ZPP4
      Conserved Domains (3) summary
      PHA03247
      Location:5 → 100
      PHA03247; large tegument protein UL36; Provisional
      TIGR02168
      Location:314 → 567
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam02759
      Location:163 → 284
      RUN; RUN domain

    13. XM_028848532.1 → XP_028704365.1  protein RUFY3 isoform X12

      UniProtKB/TrEMBL
      A0A5F7ZPP4
      Conserved Domains (3) summary
      PHA03247
      Location:5 → 100
      PHA03247; large tegument protein UL36; Provisional
      COG1196
      Location:318 → 542
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:163 → 284
      RUN; RUN domain

    14. XM_028848531.1 → XP_028704364.1  protein RUFY3 isoform X11

      UniProtKB/TrEMBL
      A0A5F7ZPP4
      Conserved Domains (3) summary
      PHA03247
      Location:5 → 100
      PHA03247; large tegument protein UL36; Provisional
      COG1196
      Location:334 → 505
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:163 → 284
      RUN; RUN domain

    15. XM_028848530.1 → XP_028704363.1  protein RUFY3 isoform X11

      UniProtKB/TrEMBL
      A0A5F7ZPP4
      Conserved Domains (3) summary
      PHA03247
      Location:5 → 100
      PHA03247; large tegument protein UL36; Provisional
      COG1196
      Location:334 → 505
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:163 → 284
      RUN; RUN domain

    16. XM_028848533.1 → XP_028704366.1  protein RUFY3 isoform X13

      UniProtKB/TrEMBL
      A0A5F7ZPP4, A0A5F7ZSI4
      Related
      ENSMMUP00000068111.1, ENSMMUT00000109378.1
      Conserved Domains (3) summary
      PHA03247
      Location:5 → 100
      PHA03247; large tegument protein UL36; Provisional
      COG1196
      Location:318 → 524
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:163 → 284
      RUN; RUN domain

    17. XM_015138573.2 → XP_014994059.1  protein RUFY3 isoform X15

      UniProtKB/TrEMBL
      H9EPE9, H9Z6I7
      Related
      ENSMMUP00000073182.1, ENSMMUT00000082172.1
      Conserved Domains (2) summary
      COG1196
      Location:258 → 464
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:103 → 224
      RUN; RUN domain

    18. XM_015138572.2 → XP_014994058.1  protein RUFY3 isoform X14

      UniProtKB/TrEMBL
      H9Z6I7
      Conserved Domains (2) summary
      COG1196
      Location:276 → 482
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:121 → 242
      RUN; RUN domain

    RNA

    1. XR_003729680.1 RNA Sequence

    2. XR_003729683.1 RNA Sequence

    3. XR_003729682.1 RNA Sequence

    4. XR_003729679.1 RNA Sequence

    5. XR_003729681.1 RNA Sequence

    6. XR_003729678.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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