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    UTS2B urotensin 2B [ Homo sapiens (human) ]

    Gene ID: 257313, updated on 10-Dec-2024

    Summary

    Official Symbol
    UTS2Bprovided by HGNC
    Official Full Name
    urotensin 2Bprovided by HGNC
    Primary source
    HGNC:HGNC:30894
    See related
    Ensembl:ENSG00000188958 MIM:618134; AllianceGenome:HGNC:30894
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    U2B; URP; UIIB; U-IIB; UTS2D
    Summary
    Predicted to enable G protein-coupled receptor binding activity. Predicted to be involved in regulation of blood pressure. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See UTS2B in Genome Data Viewer
    Location:
    3q28
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (191267168..191346182, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (194081889..194166084, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (190984957..191048315, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986171 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:190875631-190876830 Neighboring gene NANOG hESC enhancer GRCh37_chr3:190909180-190909700 Neighboring gene OSTN antisense RNA 1 Neighboring gene osteocrin Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20988 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20989 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20990 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:191019724-191020249 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:191046750-191047351 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:191047352-191047952 Neighboring gene coiled-coil domain containing 50 Neighboring gene Sharpr-MPRA regulatory region 6572 Neighboring gene PYDC2 antisense RNA 1 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_67093 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:191217087-191217641 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:191217642-191218195 Neighboring gene pyrin domain containing 2 Neighboring gene uncharacterized LOC124909472

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome-wide association with MRI atrophy measures as a quantitative trait locus for Alzheimer's disease.
    EBI GWAS Catalog

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC138371

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables G protein-coupled receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in blood vessel diameter maintenance IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of blood pressure IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region TAS
    Traceable Author Statement
    more info
     

    General protein information

    Preferred Names
    urotensin-2B
    Names
    prepro-URP
    urotensin 2 domain containing
    urotensin II-related peptide
    urotensin IIB
    urotensin-2 domain-containing protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198152.5NP_937795.2  urotensin-2B precursor

      See identical proteins and their annotated locations for NP_937795.2

      Status: VALIDATED

      Source sequence(s)
      AC068645, AC126567
      Consensus CDS
      CCDS3300.1
      UniProtKB/Swiss-Prot
      B3KQY8, D3DNW1, Q2M1Z2, Q765I0
      Related
      ENSP00000340526.5, ENST00000340524.10
      Conserved Domains (1) summary
      PLN02531
      Location:89116
      PLN02531; GTP cyclohydrolase I

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      191267168..191346182 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047447899.1XP_047303855.1  urotensin-2B isoform X2

      UniProtKB/Swiss-Prot
      B3KQY8, D3DNW1, Q2M1Z2, Q765I0
    2. XM_011512631.3XP_011510933.1  urotensin-2B isoform X2

      See identical proteins and their annotated locations for XP_011510933.1

      UniProtKB/Swiss-Prot
      B3KQY8, D3DNW1, Q2M1Z2, Q765I0
      Related
      ENSP00000398761.2, ENST00000427544.6
      Conserved Domains (1) summary
      PLN02531
      Location:89116
      PLN02531; GTP cyclohydrolase I
    3. XM_017006091.2XP_016861580.1  urotensin-2B isoform X1

      UniProtKB/TrEMBL
      F8WCV4
      Related
      ENSP00000415628.1, ENST00000446788.5

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      194081889..194166084 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054346015.1XP_054201990.1  urotensin-2B isoform X2

    2. XM_054346014.1XP_054201989.1  urotensin-2B isoform X2

    3. XM_054346013.1XP_054201988.1  urotensin-2B isoform X1