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    LOC102503427 uncharacterized LOC102503427 [ Homo sapiens (human) ]

    Gene ID: 102503427, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC102503427
    Gene description
    uncharacterized LOC102503427
    See related
    Ensembl:ENSG00000304173
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC102503427 in Genome Data Viewer
    Location:
    5q13.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (72557077..72571743)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (73038210..73052876)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (71852904..71867570)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16081 Neighboring gene Y-box binding protein 1 pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22649 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22650 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22651 Neighboring gene zinc finger protein 366 Neighboring gene Sharpr-MPRA regulatory region 3669 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16082 Neighboring gene TNPO1 divergent transcript Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22652 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:71930309-71930809 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:72004631-72005132 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:72005133-72005632 Neighboring gene ribosomal protein L7 pseudogene 22 Neighboring gene H2B.L histone variant 1, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_105008.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC020896
      Related
      ENST00000800292.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      72557077..72571743
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      73038210..73052876
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)