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    CTD-2350J17.1 uncharacterized LOC101929472 [ Homo sapiens (human) ]

    Gene ID: 101929472, updated on 10-Dec-2024

    Summary

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    Gene symbol
    CTD-2350J17.1
    Gene description
    uncharacterized LOC101929472
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 1.6) See more
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    Genomic context

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    See CTD-2350J17.1 in Genome Data Viewer
    Location:
    5p15.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (15602189..15615002, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (15541583..15554396, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (15602298..15615111, complement)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene MARK2 pseudogene 5 Neighboring gene uncharacterized LOC124900945 Neighboring gene NANOG hESC enhancer GRCh37_chr5:15425914-15426415 Neighboring gene actin beta like 2 pseudogene Neighboring gene F-box and leucine rich repeat protein 7 Neighboring gene uncharacterized LOC124900946 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr5:15786420-15787619 Neighboring gene uncharacterized LOC107986343

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_109945.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010638, AC091970

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      15602189..15615002 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      15541583..15554396 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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