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    Jdp2 Jun dimerization protein 2 [ Mus musculus (house mouse) ]

    Gene ID: 81703, updated on 9-Dec-2024

    Summary

    Official Symbol
    Jdp2provided by MGI
    Official Full Name
    Jun dimerization protein 2provided by MGI
    Primary source
    MGI:MGI:1932093
    See related
    Ensembl:ENSMUSG00000034271 AllianceGenome:MGI:1932093
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    TIF; Jundm2; Jundp2
    Summary
    Enables several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; cAMP response element binding activity; and protein dimerization activity. Involved in negative regulation of transcription by RNA polymerase II. Acts upstream of or within with a negative effect on regulation of transcription by RNA polymerase II. Acts upstream of or within chromatin remodeling and negative regulation of fat cell differentiation. Located in nucleus. Is expressed in several structures, including blood island; central nervous system; genitourinary system; musculoskeletal system; and neural retina. Orthologous to human JDP2 (Jun dimerization protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in placenta adult (RPKM 10.5), limb E14.5 (RPKM 9.3) and 26 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Jdp2 in Genome Data Viewer
    Location:
    12 D2; 12 39.74 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (85645190..85686652)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (85598656..85639878)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 32296 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:86912459-86912666 Neighboring gene predicted gene, 32348 Neighboring gene STARR-positive B cell enhancer ABC_E3062 Neighboring gene STARR-seq mESC enhancer starr_32783 Neighboring gene predicted gene, 33312 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:87002012-87002121 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:87027519-87027764 Neighboring gene basic leucine zipper transcription factor, ATF-like

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (4)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription factor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific ISO
    Inferred from Sequence Orthology
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables cAMP response element binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables chromatin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables double-stranded DNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables histone chaperone activity IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    enables histone deacetylase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables leucine zipper domain binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein heterodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein-containing complex binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables sequence-specific double-stranded DNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of RNA polymerase II transcription regulator complex ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    jun dimerization protein 2
    Names
    c-Jun dimerization protein 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205052.2NP_001191981.1  jun dimerization protein 2

      See identical proteins and their annotated locations for NP_001191981.1

      Status: VALIDATED

      Source sequence(s)
      AC115037
      Consensus CDS
      CCDS26060.1
      UniProtKB/Swiss-Prot
      P97875
      UniProtKB/TrEMBL
      Q9EQX5
      Related
      ENSMUSP00000136823.2, ENSMUST00000177587.9
      Conserved Domains (3) summary
      cd14686
      Location:82132
      bZIP; coiled coil [structural motif]
      cl21453
      Location:1861
      PKc_like; Protein Kinases, catalytic domain
      cl21462
      Location:82135
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
    2. NM_001205053.2NP_001191982.1  jun dimerization protein 2

      See identical proteins and their annotated locations for NP_001191982.1

      Status: VALIDATED

      Source sequence(s)
      AC115037
      Consensus CDS
      CCDS26060.1
      UniProtKB/Swiss-Prot
      P97875
      UniProtKB/TrEMBL
      Q9EQX5
      Related
      ENSMUSP00000129985.3, ENSMUST00000171754.3
      Conserved Domains (3) summary
      cd14686
      Location:82132
      bZIP; coiled coil [structural motif]
      cl21453
      Location:1861
      PKc_like; Protein Kinases, catalytic domain
      cl21462
      Location:82135
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
    3. NM_001401266.1NP_001388195.1  jun dimerization protein 2

      Status: VALIDATED

      Source sequence(s)
      AC115037
      UniProtKB/Swiss-Prot
      P97875
      UniProtKB/TrEMBL
      Q9EQX5
    4. NM_030887.3NP_112149.2  jun dimerization protein 2

      See identical proteins and their annotated locations for NP_112149.2

      Status: VALIDATED

      Source sequence(s)
      AC115037
      Consensus CDS
      CCDS26060.1
      UniProtKB/Swiss-Prot
      P97875
      UniProtKB/TrEMBL
      Q9EQX5
      Related
      ENSMUSP00000059724.7, ENSMUST00000050687.14
      Conserved Domains (3) summary
      cd14686
      Location:82132
      bZIP; coiled coil [structural motif]
      cl21453
      Location:1861
      PKc_like; Protein Kinases, catalytic domain
      cl21462
      Location:82135
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      85645190..85686652
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011244218.2XP_011242520.1  jun dimerization protein 2 isoform X1

      Conserved Domains (2) summary
      cd14722
      Location:205258
      bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain
      cl21453
      Location:128171
      PKc_like; Protein Kinases, catalytic domain
    2. XM_036157688.1XP_036013581.1  jun dimerization protein 2 isoform X2

      Conserved Domains (1) summary
      cl21453
      Location:128171
      PKc_like; Protein Kinases, catalytic domain