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    LOC105372321 uncharacterized LOC105372321 [ Homo sapiens (human) ]

    Gene ID: 105372321, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105372321
    Gene description
    uncharacterized LOC105372321
    See related
    Ensembl:ENSG00000268119
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in ovary (RPKM 3.3), bone marrow (RPKM 0.7) and 6 other tissues See more
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    Genomic context

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    See LOC105372321 in Genome Data Viewer
    Location:
    19p12
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (21440699..21463904, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (21579225..21602433, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (21623501..21646706, complement)

    Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 738 Neighboring gene iron-sulfur cluster assembly 1 pseudogene 7 Neighboring gene ReSE screen-validated silencer GRCh37_chr19:21579974-21580212 Neighboring gene zinc finger protein 493 Neighboring gene MPRA-validated peak3410 silencer Neighboring gene MPRA-validated peak3411 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:21643213-21643712 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:21646023-21646921 Neighboring gene H3K27ac hESC enhancer GRCh37_chr19:21657297-21657950 Neighboring gene long intergenic non-protein coding RNA 664 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:21688185-21688787 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:21688788-21689389 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:21694415-21695021 Neighboring gene zinc finger protein 429 Neighboring gene BCL2 interacting protein 3 pseudogene 26

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_187815.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010615

    2. NR_187816.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010615

    3. NR_187817.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010615

    4. NR_187818.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010615

    5. NR_187819.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010615

    6. NR_187820.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010615

    7. NR_187821.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010615

    8. NR_187822.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010615
      Related
      ENST00000801768.1

    9. NR_187823.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010615
      Related
      ENST00000600469.8

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

      Range
      21440699..21463904 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060943.1 Alternate T2T-CHM13v2.0

      Range
      21579225..21602433 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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