Fuom fucose mutarotase [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: Fuomprovided by RGD
Full Name: fucose mutarotaseprovided by RGD
Primary source: RGD:1311186
See related: EnsemblRapid:ENSRNOG00000018476 AllianceGenome:RGD:1311186
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1311186
Summary: Predicted to enable L-fucose mutarotase activity and fucose binding activity. Predicted to be involved in fucose metabolic process and fucosylation. Predicted to act upstream of or within female mating behavior and negative regulation of neuron differentiation. Orthologous to human FUOM (fucose mutarotase). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Biased expression in Kidney (RPKM 81.5), Heart (RPKM 50.7) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 1q41

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (204318180..204322690, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (194888535..194893046, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	1	NC_005100.4 (212563714..212568224, complement)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables L-fucose mutarotase activity	ISO Inferred from Sequence Orthology more info
enables fucose binding	IBA Inferred from Biological aspect of Ancestor more info
enables fucose binding	ISO Inferred from Sequence Orthology more info
enables racemase and epimerase activity, acting on carbohydrates and derivatives	IBA Inferred from Biological aspect of Ancestor more info
enables racemase and epimerase activity, acting on carbohydrates and derivatives	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in GDP-L-fucose salvage	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within female mating behavior	ISO Inferred from Sequence Orthology more info
involved_in fucose metabolic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in fucose metabolic process	ISO Inferred from Sequence Orthology more info
involved_in fucosylation	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within fucosylation	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within negative regulation of neuron differentiation	ISO Inferred from Sequence Orthology more info
acts_upstream_of neuron differentiation	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
is_active_in cytosol	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: fucose mutarotase

NP_001099780.1

EC 5.1.3.29

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.