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    C10h1orf35 similar to human chromosome 1 open reading frame 35 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 303180, updated on 27-Nov-2024

    Summary

    Official Symbol
    C10h1orf35provided by RGD
    Official Full Name
    similar to human chromosome 1 open reading frame 35provided by RGD
    Primary source
    RGD:1304587
    See related
    EnsemblRapid:ENSRNOG00000002944 AllianceGenome:RGD:1304587
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Mmtag2; RGD1304587
    Summary
    Orthologous to human C1orf35 (chromosome 1 open reading frame 35). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Kidney (RPKM 33.3), Lung (RPKM 33.1) and 9 other tissues See more
    Orthologs
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    Genomic context

    See C10h1orf35 in Genome Data Viewer
    Location:
    10q22
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (44494385..44496847)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (43993809..43997287)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (45558491..45562004)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene gap junction protein, gamma 2 Neighboring gene guanylate kinase 1 Neighboring gene mitochondrial ribosomal protein L55 Neighboring gene ARF GTPase 1 Neighboring gene Wnt family member 3A

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    multiple myeloma tumor-associated protein 2 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100551.2NP_001094021.1  multiple myeloma tumor-associated protein 2 homolog

      See identical proteins and their annotated locations for NP_001094021.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000010
      UniProtKB/Swiss-Prot
      Q5M9I6
      UniProtKB/TrEMBL
      B1WC47
      Related
      ENSRNOP00000004011.4, ENSRNOT00000004011.8
      Conserved Domains (1) summary
      pfam10159
      Location:1383
      MMtag; Kinase phosphorylation protein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      44494385..44496847
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)