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Ptprd protein tyrosine phosphatase, receptor type, D [ Rattus norvegicus (Norway rat) ]

Gene ID: 313278, updated on 27-Nov-2024

Summary

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Symbol: Ptprdprovided by RGD
Full Name: protein tyrosine phosphatase, receptor type, Dprovided by RGD
Primary source: RGD:1561090
See related: EnsemblRapid:ENSRNOG00000005711 AllianceGenome:RGD:1561090
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to enable cell adhesion molecule binding activity; protein tyrosine phosphatase activity; and signaling receptor binding activity. Involved in several processes, including cellular response to platelet-derived growth factor stimulus; regulation of postsynaptic density assembly; and synaptic membrane adhesion. Is active in glutamatergic synapse. Biomarker of restless legs syndrome. Human ortholog(s) of this gene implicated in coronary artery disease; diabetes mellitus; hypertension; and type 2 diabetes mellitus. Orthologous to human PTPRD (protein tyrosine phosphatase receptor type D). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Biased expression in Brain (RPKM 355.8), Kidney (RPKM 349.4) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

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See Ptprd in Genome Data Viewer

Location:: 5q31

Exon count:: 48

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	5	NC_086023.1 (95093221..97415498, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	5	NC_051340.1 (90046993..90698977, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	5	NC_005104.4 (92862229..93514071, complement)

Chromosome 5 - NC_086023.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Protein tyrosine phosphatase receptor type delta (PTPRD) gene in an animal model of restless legs syndrome.
Title: Protein tyrosine phosphatase receptor type delta (PTPRD) gene in an animal model of restless legs syndrome.
Methylation-mediated silencing of PTPRD induces pulmonary hypertension by promoting pulmonary arterial smooth muscle cell migration via the PDGFRB/PLCgamma1 axis.
Title: Methylation-mediated silencing of PTPRD induces pulmonary hypertension by promoting pulmonary arterial smooth muscle cell migration via the PDGFRB/PLCγ1 axis.
Trans-synaptic adhesions between netrin-G ligand-3 (NGL-3) and receptor tyrosine phosphatases LAR, protein-tyrosine phosphatase delta (PTPdelta), and PTPsigma via specific domains regulate excitatory synapse formation.
Title: Trans-synaptic adhesions between netrin-G ligand-3 (NGL-3) and receptor tyrosine phosphatases LAR, protein-tyrosine phosphatase delta (PTPdelta), and PTPsigma via specific domains regulate excitatory synapse formation.

Submit: New GeneRIF Correction

General gene information

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Markers

RH135104 (e-PCR)
- UniSTS:218381

BE097842 (e-PCR)
- UniSTS:244764

RH138901 (e-PCR)
- UniSTS:220988

RH142256 (e-PCR)
- UniSTS:231503

D5Rat107 (e-PCR)
- UniSTS:118889

AI703917 (e-PCR)
- UniSTS:249711

PTPRD (e-PCR)
- UniSTS:512659

BF410120 (e-PCR)
- UniSTS:246705

GDB:582179 (e-PCR)
- UniSTS:157878

Ptprd (e-PCR), detects polymorphism
- UniSTS:545976

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables cell adhesion molecule binding	ISO Inferred from Sequence Orthology more info
enables histone H2AXY142 phosphatase activity	IEA Inferred from Electronic Annotation more info
enables non-membrane spanning protein tyrosine phosphatase activity	IEA Inferred from Electronic Annotation more info
enables protein tyrosine phosphatase activity	IBA Inferred from Biological aspect of Ancestor more info
enables protein tyrosine phosphatase activity, metal-dependent	IEA Inferred from Electronic Annotation more info
enables signaling receptor binding	ISO Inferred from Sequence Orthology more info

Process	Evidence Code	Pubs
involved_in cellular response to hypoxia	IEP Inferred from Expression Pattern more info	PubMed
involved_in cellular response to platelet-derived growth factor stimulus	IEP Inferred from Expression Pattern more info	PubMed
involved_in chromatin remodeling	IEA Inferred from Electronic Annotation more info
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	ISO Inferred from Sequence Orthology more info
involved_in modulation of chemical synaptic transmission	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within negative regulation of receptor signaling pathway via JAK-STAT	ISO Inferred from Sequence Orthology more info
involved_in nervous system development	IBA Inferred from Biological aspect of Ancestor more info
involved_in neuron differentiation	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of dendrite morphogenesis	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of dendritic spine morphogenesis	IEA Inferred from Electronic Annotation more info
involved_in positive regulation of dendritic spine morphogenesis	ISO Inferred from Sequence Orthology more info
involved_in positive regulation of synapse assembly	ISO Inferred from Sequence Orthology more info
involved_in presynapse assembly	ISO Inferred from Sequence Orthology more info
involved_in presynaptic membrane assembly	ISO Inferred from Sequence Orthology more info
acts_upstream_of_or_within regulation of immune response	ISO Inferred from Sequence Orthology more info
involved_in regulation of postsynaptic density assembly	EXP Inferred from Experiment more info	PubMed
involved_in regulation of postsynaptic density assembly	IDA Inferred from Direct Assay more info	PubMed
involved_in regulation of postsynaptic density assembly	ISO Inferred from Sequence Orthology more info
involved_in signal transduction	IBA Inferred from Biological aspect of Ancestor more info
involved_in synaptic membrane adhesion	IBA Inferred from Biological aspect of Ancestor more info
involved_in synaptic membrane adhesion	IDA Inferred from Direct Assay more info	PubMed
involved_in synaptic membrane adhesion	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in synaptic membrane adhesion	ISO Inferred from Sequence Orthology more info
involved_in trans-synaptic signaling	ISO Inferred from Sequence Orthology more info
involved_in trans-synaptic signaling by trans-synaptic complex	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
is_active_in Schaffer collateral - CA1 synapse	ISO Inferred from Sequence Orthology more info
is_active_in glutamatergic synapse	EXP Inferred from Experiment more info	PubMed
is_active_in glutamatergic synapse	IDA Inferred from Direct Assay more info	PubMed
is_active_in glutamatergic synapse	ISO Inferred from Sequence Orthology more info
is_active_in hippocampal mossy fiber to CA3 synapse	ISO Inferred from Sequence Orthology more info
is_active_in presynaptic membrane	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: receptor-type tyrosine-protein phosphatase delta

XP_038967365.1

EC 3.1.3.48

XP_038967368.1

EC 3.1.3.48

XP_038967379.1

EC 3.1.3.48

XP_038967381.1

EC 3.1.3.48

XP_038967383.1

EC 3.1.3.48

XP_038967384.1

EC 3.1.3.48

XP_038967387.1

EC 3.1.3.48

XP_038967389.1

EC 3.1.3.48

XP_038967390.1

EC 3.1.3.48

XP_038967391.1

EC 3.1.3.48

XP_063144608.1

EC 3.1.3.48

XP_063144609.1

EC 3.1.3.48

XP_063144610.1

EC 3.1.3.48

XP_063144611.1

EC 3.1.3.48

XP_063144612.1

EC 3.1.3.48

XP_063144613.1

EC 3.1.3.48

XP_063144614.1

EC 3.1.3.48

XP_063144615.1

EC 3.1.3.48

XP_063144616.1

EC 3.1.3.48

XP_063144617.1

EC 3.1.3.48

XP_063144618.1

EC 3.1.3.48

XP_063144619.1

EC 3.1.3.48

XP_063144620.1

EC 3.1.3.48

XP_063144621.1

EC 3.1.3.48

XP_063144622.1

EC 3.1.3.48

XP_063144623.1

EC 3.1.3.48

XP_063144624.1

EC 3.1.3.48

XP_063144625.1

EC 3.1.3.48

XP_063144626.1

EC 3.1.3.48

XP_063144627.1

EC 3.1.3.48

XP_063144629.1

EC 3.1.3.48

XP_063144630.1

EC 3.1.3.48

XP_063144631.1

EC 3.1.3.48

XP_063144632.1

EC 3.1.3.48

XP_063144634.1

EC 3.1.3.48

XP_063144635.1

EC 3.1.3.48

XP_063144636.1

EC 3.1.3.48

XP_063144637.1

EC 3.1.3.48

XP_063144638.1

EC 3.1.3.48

XP_063144639.1

EC 3.1.3.48

XP_063144640.1

EC 3.1.3.48

XP_063144641.1

EC 3.1.3.48

XP_063144642.1

EC 3.1.3.48

XP_063144643.1

EC 3.1.3.48

XP_063144644.1

EC 3.1.3.48

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001427220.1 → NP_001414149.1 receptor-type tyrosine-protein phosphatase delta precursor

Status: VALIDATED

Source sequence(s)

JAXUCZ010000005

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086023.1 Reference GRCr8

Range

95093221..97415498 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_063288539.1 → XP_063144609.1 receptor-type tyrosine-protein phosphatase delta isoform X1
XM_063288540.1 → XP_063144610.1 receptor-type tyrosine-protein phosphatase delta isoform X1
XM_039111462.2 → XP_038967390.1 receptor-type tyrosine-protein phosphatase delta isoform X42

UniProtKB/TrEMBL

A0A8I6A789

Conserved Domains (8) summary

cd00063
Location:317 → 406

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd14624
Location:916 → 1199

R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1

cd14628
Location:1200 → 1491

R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2

pfam07679
Location:31 → 122

I-set; Immunoglobulin I-set domain

pfam18861
Location:783 → 875

PTP_tm; Transmembrane domain of protein tyrosine phosphatase, receptor type J

cd00096
Location:39 → 43

Ig; Ig strand A' [structural motif]

cd05738
Location:134 → 224

IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains

cd05739
Location:233 → 314

IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
XM_039111461.2 → XP_038967389.1 receptor-type tyrosine-protein phosphatase delta isoform X40

UniProtKB/TrEMBL

A0A8I5ZQN2

Conserved Domains (8) summary

cd00063
Location:317 → 406

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd14624
Location:920 → 1203

R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1

cd14628
Location:1204 → 1495

R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2

pfam07679
Location:31 → 122

I-set; Immunoglobulin I-set domain

pfam18861
Location:783 → 875

PTP_tm; Transmembrane domain of protein tyrosine phosphatase, receptor type J

cd00096
Location:39 → 43

Ig; Ig strand A' [structural motif]

cd05738
Location:134 → 224

IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains

cd05739
Location:233 → 314

IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
XM_063288574.1 → XP_063144644.1 receptor-type tyrosine-protein phosphatase delta isoform X41
XM_063288566.1 → XP_063144636.1 receptor-type tyrosine-protein phosphatase delta isoform X27
XM_063288565.1 → XP_063144635.1 receptor-type tyrosine-protein phosphatase delta isoform X26
XM_063288564.1 → XP_063144634.1 receptor-type tyrosine-protein phosphatase delta isoform X25
XM_063288559.1 → XP_063144629.1 receptor-type tyrosine-protein phosphatase delta isoform X21

Related

ENSRNOP00000089430.3, ENSRNOT00000094348.3
XM_039111440.2 → XP_038967368.1 receptor-type tyrosine-protein phosphatase delta isoform X20

UniProtKB/TrEMBL

A0A8I6AEM0

Conserved Domains (8) summary

cd00063
Location:317 → 406

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd14624
Location:1322 → 1605

R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1

cd14628
Location:1606 → 1897

R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2

pfam07679
Location:31 → 122

I-set; Immunoglobulin I-set domain

pfam18861
Location:1185 → 1277

PTP_tm; Transmembrane domain of protein tyrosine phosphatase, receptor type J

cd00096
Location:39 → 43

Ig; Ig strand A' [structural motif]

cd05738
Location:134 → 224

IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains

cd05739
Location:233 → 314

IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
XM_063288554.1 → XP_063144624.1 receptor-type tyrosine-protein phosphatase delta isoform X16
XM_063288553.1 → XP_063144623.1 receptor-type tyrosine-protein phosphatase delta isoform X15
XM_063288556.1 → XP_063144626.1 receptor-type tyrosine-protein phosphatase delta isoform X18

Related

ENSRNOP00000086806.3, ENSRNOT00000113220.3
XM_063288550.1 → XP_063144620.1 receptor-type tyrosine-protein phosphatase delta isoform X11
XM_039111459.2 → XP_038967387.1 receptor-type tyrosine-protein phosphatase delta isoform X39

UniProtKB/TrEMBL

A0A8I5ZQN2

Conserved Domains (8) summary

cd00063
Location:321 → 410

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd14624
Location:924 → 1207

R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1

cd14628
Location:1208 → 1499

R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2

pfam07679
Location:31 → 122

I-set; Immunoglobulin I-set domain

pfam18861
Location:787 → 879

PTP_tm; Transmembrane domain of protein tyrosine phosphatase, receptor type J

cd00096
Location:39 → 43

Ig; Ig strand A' [structural motif]

cd05738
Location:134 → 224

IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains

cd05739
Location:237 → 318

IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
XM_063288548.1 → XP_063144618.1 receptor-type tyrosine-protein phosphatase delta isoform X9
XM_063288562.1 → XP_063144632.1 receptor-type tyrosine-protein phosphatase delta isoform X24
XM_039111453.2 → XP_038967381.1 receptor-type tyrosine-protein phosphatase delta isoform X34

UniProtKB/TrEMBL

A0A8I5ZQN2

Conserved Domains (7) summary

cd00063
Location:327 → 416

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd14624
Location:931 → 1214

R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1

cd14628
Location:1215 → 1506

R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2

pfam07679
Location:31 → 122

I-set; Immunoglobulin I-set domain

cd00096
Location:39 → 43

Ig; Ig strand A' [structural motif]

cd05738
Location:134 → 230

IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains

cd05739
Location:243 → 324

IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
XM_039111456.2 → XP_038967384.1 receptor-type tyrosine-protein phosphatase delta isoform X37

UniProtKB/TrEMBL

A0A8I5ZQN2

Conserved Domains (7) summary

cd00063
Location:327 → 416

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd14624
Location:928 → 1211

R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1

cd14628
Location:1212 → 1503

R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2

pfam07679
Location:31 → 122

I-set; Immunoglobulin I-set domain

cd00096
Location:39 → 43

Ig; Ig strand A' [structural motif]

cd05738
Location:134 → 230

IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains

cd05739
Location:243 → 324

IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
XM_063288561.1 → XP_063144631.1 receptor-type tyrosine-protein phosphatase delta isoform X23
XM_063288544.1 → XP_063144614.1 receptor-type tyrosine-protein phosphatase delta isoform X5
XM_063288571.1 → XP_063144641.1 receptor-type tyrosine-protein phosphatase delta isoform X32

Related

ENSRNOP00000098524.2, ENSRNOT00000120941.2
XM_063288573.1 → XP_063144643.1 receptor-type tyrosine-protein phosphatase delta isoform X38
XM_063288557.1 → XP_063144627.1 receptor-type tyrosine-protein phosphatase delta isoform X19
XM_063288546.1 → XP_063144616.1 receptor-type tyrosine-protein phosphatase delta isoform X7
XM_039111455.2 → XP_038967383.1 receptor-type tyrosine-protein phosphatase delta isoform X36

UniProtKB/TrEMBL

A0A8I5ZQN2

Conserved Domains (7) summary

cd00063
Location:330 → 419

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd14624
Location:930 → 1213

R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1

cd14628
Location:1214 → 1505

R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2

pfam07679
Location:31 → 122

I-set; Immunoglobulin I-set domain

cd00096
Location:39 → 43

Ig; Ig strand A' [structural motif]

cd05738
Location:134 → 233

IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains

cd05739
Location:246 → 327

IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
XM_063288570.1 → XP_063144640.1 receptor-type tyrosine-protein phosphatase delta isoform X31
XM_039111451.2 → XP_038967379.1 receptor-type tyrosine-protein phosphatase delta isoform X33

UniProtKB/TrEMBL

A0A8I5ZQN2

Conserved Domains (7) summary

cd00063
Location:330 → 419

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd14624
Location:934 → 1217

R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1

cd14628
Location:1218 → 1509

R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2

pfam07679
Location:31 → 122

I-set; Immunoglobulin I-set domain

cd00096
Location:39 → 43

Ig; Ig strand A' [structural motif]

cd05738
Location:134 → 233

IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains

cd05739
Location:246 → 327

IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
XM_063288568.1 → XP_063144638.1 receptor-type tyrosine-protein phosphatase delta isoform X29
XM_063288572.1 → XP_063144642.1 receptor-type tyrosine-protein phosphatase delta isoform X35
XM_063288569.1 → XP_063144639.1 receptor-type tyrosine-protein phosphatase delta isoform X30
XM_063288567.1 → XP_063144637.1 receptor-type tyrosine-protein phosphatase delta isoform X28
XM_063288560.1 → XP_063144630.1 receptor-type tyrosine-protein phosphatase delta isoform X22
XM_063288555.1 → XP_063144625.1 receptor-type tyrosine-protein phosphatase delta isoform X17
XM_063288549.1 → XP_063144619.1 receptor-type tyrosine-protein phosphatase delta isoform X10
XM_063288547.1 → XP_063144617.1 receptor-type tyrosine-protein phosphatase delta isoform X8
XM_039111463.2 → XP_038967391.1 receptor-type tyrosine-protein phosphatase delta isoform X4

UniProtKB/TrEMBL

A0A8I6A6R5

Conserved Domains (9) summary

cd00063
Location:330 → 419

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd14624
Location:1358 → 1641

R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1

cd14628
Location:1642 → 1933

R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2

pfam00041
Location:720 → 819

fn3; Fibronectin type III domain

pfam07679
Location:31 → 122

I-set; Immunoglobulin I-set domain

pfam18861
Location:1207 → 1299

PTP_tm; Transmembrane domain of protein tyrosine phosphatase, receptor type J

cd00096
Location:39 → 43

Ig; Ig strand A' [structural motif]

cd05738
Location:134 → 233

IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains

cd05739
Location:246 → 327

IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
XM_039111437.2 → XP_038967365.1 receptor-type tyrosine-protein phosphatase delta isoform X14

UniProtKB/TrEMBL

A0A8I6A1V1

Conserved Domains (8) summary

cd00063
Location:330 → 419

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cd14624
Location:1341 → 1624

R-PTPc-D-1; catalytic domain of receptor-type tyrosine-protein phosphatase D, repeat 1

cd14628
Location:1625 → 1916

R-PTP-D-2; PTP-like domain of receptor-type tyrosine-protein phosphatase D, repeat 2

pfam00041
Location:720 → 819

fn3; Fibronectin type III domain

pfam07679
Location:31 → 122

I-set; Immunoglobulin I-set domain

cd00096
Location:39 → 43

Ig; Ig strand A' [structural motif]

cd05738
Location:134 → 233

IgI_2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F; member of the I-set of IgSF domains

cd05739
Location:246 → 327

IgI_3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F (also known as LAR), type IIa; member of the I-set of IgSF domains
XM_063288542.1 → XP_063144612.1 receptor-type tyrosine-protein phosphatase delta isoform X2
XM_063288543.1 → XP_063144613.1 receptor-type tyrosine-protein phosphatase delta isoform X3
XM_063288552.1 → XP_063144622.1 receptor-type tyrosine-protein phosphatase delta isoform X13
XM_063288545.1 → XP_063144615.1 receptor-type tyrosine-protein phosphatase delta isoform X6
XM_063288551.1 → XP_063144621.1 receptor-type tyrosine-protein phosphatase delta isoform X12
XM_063288538.1 → XP_063144608.1 receptor-type tyrosine-protein phosphatase delta isoform X1
XM_063288541.1 → XP_063144611.1 receptor-type tyrosine-protein phosphatase delta isoform X1

Related

ENSRNOP00000091521.3, ENSRNOT00000119354.3