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    Gm1968 predicted gene 1968 [ Mus musculus (house mouse) ]

    Gene ID: 328657, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Gm1968provided by MGI
    Official Full Name
    predicted gene 1968provided by MGI
    Primary source
    MGI:MGI:3584525
    See related
    Ensembl:ENSMUSG00000075286 AllianceGenome:MGI:3584525
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Is expressed in embryo. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Gm1968 in Genome Data Viewer
    Location:
    16 B2; 16 21.01 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (29776745..29797942, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (29957927..29979124, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 32740 Neighboring gene predicted gene, 53945 Neighboring gene predicted gene, 52263 Neighboring gene STARR-seq mESC enhancer starr_40544 Neighboring gene STARR-seq mESC enhancer starr_40545 Neighboring gene STARR-seq mESC enhancer starr_40548 Neighboring gene predicted gene, 32796 Neighboring gene RIKEN cDNA 4632428C04 gene Neighboring gene RIKEN cDNA 9030404E10 gene Neighboring gene STARR-positive B cell enhancer ABC_E7436 Neighboring gene STARR-positive B cell enhancer ABC_E10898

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Hes1 is expressed in the second heart field and is required for outflow tract development. Rochais F, et al. PLoS One, 2009 Jul 17. PMID 19609448, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_037689.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC164166, CT030736
      Related
      ENSMUST00000333632.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      29776745..29797942 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001033403.2: Suppressed sequence

      Description
      NM_001033403.2: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
    Nucleotide Protein Strain
    Heading Accession and Version

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