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    Snord118 small nucleolar RNA, C/D box 118 [ Mus musculus (house mouse) ]

    Gene ID: 100216530, updated on 28-Oct-2024

    Summary

    Official Symbol
    Snord118provided by MGI
    Official Full Name
    small nucleolar RNA, C/D box 118provided by MGI
    Primary source
    MGI:MGI:3819519
    See related
    Ensembl:ENSMUSG00000064899 AllianceGenome:MGI:3819519
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MBI-34
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    Genomic context

    See Snord118 in Genome Data Viewer
    Location:
    11 B3; 11 42.35 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (68964252..68964388)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (69073426..69073562)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E5238 Neighboring gene nuclear encoded tRNA trytophan 6 (anticodon CCA) Neighboring gene STARR-positive B cell enhancer ABC_E590 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:68887007-68887116 Neighboring gene transmembrane protein 107 Neighboring gene STARR-positive B cell enhancer ABC_E7003 Neighboring gene vesicle-associated membrane protein 2 Neighboring gene STARR-positive B cell enhancer ABC_E197 Neighboring gene STARR-positive B cell enhancer ABC_E733 Neighboring gene period circadian clock 1

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Other Names

    • 5.4S snRNA

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_028566.4 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL645902
      Related
      ENSMUST00000082965.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      68964252..68964388
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)