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    Hnrnpa1l2-ps2 heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 2 [ Mus musculus (house mouse) ]

    Gene ID: 545091, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Hnrnpa1l2-ps2provided by MGI
    Official Full Name
    heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 2provided by MGI
    Primary source
    MGI:MGI:3645633
    See related
    Ensembl:ENSMUSG00000021927 AllianceGenome:MGI:3645633
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm5803; EG545091
    Summary
    Orthologous to human HNRNPA1L2 (heterogeneous nuclear ribonucleoprotein A1 like 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Hnrnpa1l2-ps2 in Genome Data Viewer
    Location:
    15 A2; 15 8.54 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (22713906..22715070, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (22713820..22714984, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene cadherin 12 Neighboring gene STARR-seq mESC enhancer starr_38121 Neighboring gene STARR-seq mESC enhancer starr_38122 Neighboring gene STARR-seq mESC enhancer starr_38123 Neighboring gene STARR-seq mESC enhancer starr_38124 Neighboring gene predicted gene, 25101 Neighboring gene STARR-seq mESC enhancer starr_38125 Neighboring gene STARR-seq mESC enhancer starr_38126 Neighboring gene STARR-seq mESC enhancer starr_38127 Neighboring gene STARR-seq mESC enhancer starr_38128 Neighboring gene STARR-seq mESC enhancer starr_38129 Neighboring gene STARR-seq mESC enhancer starr_38133 Neighboring gene STARR-seq mESC enhancer starr_38132 Neighboring gene STARR-seq mESC enhancer starr_38134 Neighboring gene STARR-seq mESC enhancer starr_38135 Neighboring gene predicted gene, 41278 Neighboring gene STARR-seq mESC enhancer starr_38138 Neighboring gene STARR-seq mESC enhancer starr_38139 Neighboring gene STARR-seq mESC enhancer starr_38140 Neighboring gene cadherin 18 Neighboring gene STARR-seq mESC enhancer starr_38141 Neighboring gene STARR-seq mESC enhancer starr_38142 Neighboring gene STARR-seq mESC enhancer starr_38144 Neighboring gene STARR-seq mESC enhancer starr_38145 Neighboring gene predicted gene, 19840 Neighboring gene predicted gene, 24656

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC189927

    General protein information

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    Preferred Names
    uncharacterized protein LOC545091

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001165971.1 → NP_001159443.1  uncharacterized protein LOC545091

      See identical proteins and their annotated locations for NP_001159443.1

      Status: VALIDATED

      Source sequence(s)
      BC172092
      UniProtKB/TrEMBL
      Q3TFB1
      Related
      ENSMUST00000022493.7
      Conserved Domains (2) summary
      pfam11627
      Location:257 → 281
      HnRNPA1; Nuclear factor hnRNPA1
      cl17169
      Location:12 → 92
      RRM_SF; RNA recognition motif (RRM) superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      22713906..22715070 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_005916.3: Suppressed sequence

      Description
      NG_005916.3: This RefSeq was permanently suppressed because there is evidence this locus is transcribed.

    2. NM_001081296.1: Suppressed sequence

      Description
      NM_001081296.1: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.
    Nucleotide Protein Strain
    Heading Accession and Version

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