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    Vom1r6 vomeronasal 1 receptor 6 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 494231, updated on 27-Nov-2024

    Summary

    Symbol
    Vom1r6provided by RGD
    Full Name
    vomeronasal 1 receptor 6provided by RGD
    Primary source
    RGD:1359507
    See related
    EnsemblRapid:ENSRNOG00000084731 AllianceGenome:RGD:1359507
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    V1re2
    Summary
    Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; response to pheromone; and sensory perception of chemical stimulus. Predicted to be located in plasma membrane. Orthologous to human VN1R2 (vomeronasal 1 receptor 2). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See Vom1r6 in Genome Data Viewer
    Location:
    1q12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (68499546..68503114)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (59826557..59830125)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (60044985..60045881)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene formyl peptide receptor 2 like 1 Neighboring gene vomeronasal 2 receptor, pseudogene 23 Neighboring gene vomeronasal 1 receptor 7 Neighboring gene TATA-box binding protein associated factor 5 like, pseudogene 1

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables pheromone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to pheromone IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    vomeronasal 1 receptor 6
    Names
    vomernasal 1 receptor Vom1r6
    vomeronasal 1 receptor, E2
    vomeronasal V1r-type receptor V1re2
    vomeronasal type-1 receptor 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001009512.2NP_001009512.1  vomeronasal 1 receptor 6

      See identical proteins and their annotated locations for NP_001009512.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A6KB79, Q5J3M0
      Related
      ENSRNOP00000108534.1, ENSRNOT00000134919.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      68499546..68503114
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)