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    SNORA46 small nucleolar RNA, H/ACA box 46 [ Homo sapiens (human) ]

    Gene ID: 677827, updated on 10-Dec-2024

    Summary

    Official Symbol
    SNORA46provided by HGNC
    Official Full Name
    small nucleolar RNA, H/ACA box 46provided by HGNC
    Primary source
    HGNC:HGNC:32639
    See related
    Ensembl:ENSG00000207493 AllianceGenome:HGNC:32639
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ACA46
    Summary
    Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See SNORA46 in Genome Data Viewer
    Location:
    16q21
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (58548499..58548633, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (64343732..64343866, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (58582403..58582537, complement)

    Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene NDRG family member 4 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:58533905-58534721 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:58534722-58535539 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:58535540-58536356 Neighboring gene RNA, U6 small nuclear 103, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10929 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7554 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10930 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_43903 Neighboring gene SET domain containing 6, protein lysine methyltransferase Neighboring gene CCR4-NOT transcription complex subunit 1 Neighboring gene small nucleolar RNA, H/ACA box 50A Neighboring gene transmembrane protein 254-like

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • ACA46 snoRNA

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002978.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AJ609467
      Related
      ENST00000384762.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

      Range
      58548499..58548633 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060940.1 Alternate T2T-CHM13v2.0

      Range
      64343732..64343866 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)