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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029490.2 RefSeqGene
- Range
-
5340..117647
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001042440.5 → NP_001035905.1 calpastatin isoform f
See identical proteins and their annotated locations for NP_001035905.1
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- Consensus CDS
-
CCDS54882.1
- UniProtKB/TrEMBL
-
A0A6Q8PGN6
- Related
- ENSP00000379157.2, ENST00000395812.6
- Conserved Domains (1) summary
-
- pfam00748
Location:412 → 542
- Calpain_inhib; Calpain inhibitor
-
NM_001042441.3 → NP_001035906.1 calpastatin isoform g
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/TrEMBL
-
A0A6Q8PGN6
- Conserved Domains (1) summary
-
- pfam00748
Location:434 → 564
- Calpain_inhib; Calpain inhibitor
-
NM_001042442.3 → NP_001035907.1 calpastatin isoform h
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- Consensus CDS
-
CCDS43344.1
- UniProtKB/TrEMBL
-
A0A0C4DGB5
- Related
- ENSP00000501713.1, ENST00000674984.1
- Conserved Domains (1) summary
-
- pfam00748
Location:431 → 561
- Calpain_inhib; Calpain inhibitor
-
NM_001042443.3 → NP_001035908.1 calpastatin isoform i
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/Swiss-Prot
- B7Z468, G5E946, G5E9D3, O95360, P20810, Q05DE8, Q7Z4K0, Q96D08, Q9H1Z5
- UniProtKB/TrEMBL
-
B7Z574
- Related
- ENSP00000379158.2, ENST00000395813.5
- Conserved Domains (1) summary
-
- pfam00748
Location:370 → 500
- Calpain_inhib; Calpain inhibitor
-
NM_001042444.3 → NP_001035909.1 calpastatin isoform j
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- Consensus CDS
-
CCDS93750.1
- UniProtKB/TrEMBL
-
A0A6Q8PGG5
- Related
- ENSP00000501659.1, ENST00000675033.1
- Conserved Domains (1) summary
-
- pfam00748
Location:329 → 459
- Calpain_inhib; Calpain inhibitor
-
NM_001042445.3 → NP_001035910.1 calpastatin isoform k
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- Consensus CDS
-
CCDS83017.1
- UniProtKB/TrEMBL
- A0A6Q8PG72, E9PCH5
- Related
- ENSP00000426946.1, ENST00000509903.5
- Conserved Domains (1) summary
-
- pfam00748
Location:335 → 465
- Calpain_inhib; Calpain inhibitor
-
NM_001042446.3 → NP_001035911.1 calpastatin isoform l
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/TrEMBL
-
A0A6Q8PGG5
- Conserved Domains (1) summary
-
- pfam00748
Location:316 → 446
- Calpain_inhib; Calpain inhibitor
-
NM_001190442.2 → NP_001177371.1 calpastatin isoform m
See identical proteins and their annotated locations for NP_001177371.1
Status: REVIEWED
- Source sequence(s)
-
AB208816, AC008906, AC020900, AL832349, AY189741, DB450697
- Consensus CDS
-
CCDS54883.1
- UniProtKB/TrEMBL
-
B7Z4U9
- Related
- ENSP00000343421.3, ENST00000338252.7
- Conserved Domains (1) summary
-
- pfam00748
Location:357 → 487
- Calpain_inhib; Calpain inhibitor
-
NM_001284212.4 → NP_001271141.1 calpastatin isoform n
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, BX648397, U31345
- UniProtKB/TrEMBL
-
A0A6Q8PGN6
- Related
- ENSP00000502345.1, ENST00000674702.1
- Conserved Domains (1) summary
-
- pfam00748
Location:329 → 459
- Calpain_inhib; Calpain inhibitor
-
NM_001284213.4 → NP_001271142.1 calpastatin isoform o
Status: REVIEWED
- Source sequence(s)
-
AC020900, AK300624, BM676369, BQ940454, CA775469, KC877037
- Consensus CDS
-
CCDS75279.1
- UniProtKB/TrEMBL
- B7Z6N0, E9PDE4
- Related
- ENSP00000425670.1, ENST00000504465.5
- Conserved Domains (1) summary
-
- pfam00748
Location:298 → 428
- Calpain_inhib; Calpain inhibitor
-
NM_001330626.2 → NP_001317555.1 calpastatin isoform p
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/TrEMBL
-
Q59HE3
-
NM_001330627.2 → NP_001317556.1 calpastatin isoform q
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/TrEMBL
-
A0A6Q8PGN6
- Conserved Domains (1) summary
-
- pfam00748
Location:412 → 542
- Calpain_inhib; Calpain inhibitor
-
NM_001330628.2 → NP_001317557.1 calpastatin isoform r
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/TrEMBL
-
A0A1S5UZ18
- Conserved Domains (1) summary
-
- pfam00748
Location:397 → 527
- Calpain_inhib; Calpain inhibitor
-
NM_001330629.2 → NP_001317558.1 calpastatin isoform s
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/TrEMBL
-
A0A0C4DGB5
-
NM_001330630.2 → NP_001317559.1 calpastatin isoform t
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/TrEMBL
-
A0A6Q8PGG5
- Related
- ENSP00000501797.1, ENST00000674587.1
-
NM_001330631.2 → NP_001317560.1 calpastatin isoform m
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- Consensus CDS
-
CCDS54883.1
- UniProtKB/TrEMBL
-
B7Z4U9
- Related
- ENSP00000502136.1, ENST00000675614.1
-
NM_001330632.2 → NP_001317561.1 calpastatin isoform u
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/TrEMBL
-
E7EVY3
-
NM_001330633.2 → NP_001317562.1 calpastatin isoform v
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/TrEMBL
-
A0A6Q8PGG5
- Conserved Domains (1) summary
-
- pfam00748
Location:351 → 481
- Calpain_inhib; Calpain inhibitor
-
NM_001330634.2 → NP_001317563.1 calpastatin isoform w
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/TrEMBL
-
A0A6Q8PGG5
- Related
- ENSP00000502244.1, ENST00000675479.1
-
NM_001375317.1 → NP_001362246.1 calpastatin isoform x
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC020900, KC877037
- Consensus CDS
-
CCDS93749.1
- UniProtKB/TrEMBL
- A0A0C4DGB5, A0A6Q8PH20
- Related
- ENSP00000502449.1, ENST00000675663.1
- Conserved Domains (1) summary
-
- pfam00748
Location:416 → 546
- Calpain_inhib; Calpain inhibitor
-
NM_001423250.1 → NP_001410179.1 calpastatin isoform i
Status: REVIEWED
- Source sequence(s)
-
AC008592, AC008906, AC008951, AC020900, AC104123, KC877037
- UniProtKB/Swiss-Prot
- B7Z468, G5E946, G5E9D3, O95360, P20810, Q05DE8, Q7Z4K0, Q96D08, Q9H1Z5
- UniProtKB/TrEMBL
-
B7Z574
-
NM_001423251.1 → NP_001410180.1 calpastatin isoform m
Status: REVIEWED
- Source sequence(s)
-
AC008592, AC008906, AC008951, AC020900, AC104123, KC877037
- UniProtKB/TrEMBL
-
B7Z4U9
-
NM_001423252.1 → NP_001410181.1 calpastatin isoform m
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC008951, AC020900, AC104123, KC877037
- UniProtKB/TrEMBL
-
B7Z4U9
-
NM_001423253.1 → NP_001410182.1 calpastatin isoform b
Status: REVIEWED
- Source sequence(s)
-
AC008592, AC008906, AC008951, AC020900, AC104123, KC877037
- UniProtKB/TrEMBL
-
B7Z574
-
NM_001423254.1 → NP_001410183.1 calpastatin isoform b
Status: REVIEWED
- Source sequence(s)
-
AC008592, AC008906, AC008951, AC020900, AC104123, KC877037
- UniProtKB/TrEMBL
-
B7Z574
-
NM_001423255.1 → NP_001410184.1 calpastatin isoform k
Status: REVIEWED
- Source sequence(s)
-
AC008592, AC008906, AC008951, AC020900, KC877037
- UniProtKB/TrEMBL
- A0A6Q8PG72, E9PCH5
-
NM_001423256.1 → NP_001410185.1 calpastatin isoform k
Status: REVIEWED
- Source sequence(s)
-
AC008592, AC008906, AC008951, AC020900, KC877037
- UniProtKB/TrEMBL
- A0A6Q8PG72, E9PCH5
-
NM_001423257.1 → NP_001410186.1 calpastatin isoform k
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC008951, AC020900, AC104123, KC877037
- UniProtKB/TrEMBL
- A0A6Q8PG72, E9PCH5
-
NM_001423258.1 → NP_001410187.1 calpastatin isoform k
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC008951, AC020900, AC104123, KC877037
- UniProtKB/TrEMBL
- A0A6Q8PG72, E9PCH5
-
NM_001423259.1 → NP_001410188.1 calpastatin isoform t
Status: REVIEWED
- Source sequence(s)
-
AC008592, AC008906, AC008951, AC020900, AC104123, KC877037
- UniProtKB/TrEMBL
-
A0A6Q8PG72
-
NM_001423260.1 → NP_001410189.1 calpastatin isoform l
Status: REVIEWED
- Source sequence(s)
-
AC008906, AC008951, AC020900, AC099509, AC104123, KC877037
- UniProtKB/TrEMBL
-
A0A6Q8PGG5
- Related
- ENSP00000520668.1, ENST00000718093.1
-
NM_001750.7 → NP_001741.4 calpastatin isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AC008906, AC020900, KC877037
- UniProtKB/TrEMBL
-
Q59HE3
- Related
- ENSP00000501872.1, ENST00000675179.1
- Conserved Domains (1) summary
-
- pfam00748
Location:453 → 583
- Calpain_inhib; Calpain inhibitor
-
NM_173060.5 → NP_775083.1 calpastatin isoform b
See identical proteins and their annotated locations for NP_775083.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) represents use of an alternate promoter compared to variant 1.
- Source sequence(s)
-
AC008906, AL832174, AL832349, AY189741
- Consensus CDS
-
CCDS4082.1
- UniProtKB/TrEMBL
-
B7Z574
- Related
- ENSP00000312523.5, ENST00000309190.9
- Conserved Domains (1) summary
-
- pfam00748
Location:348 → 478
- Calpain_inhib; Calpain inhibitor
RNA
-
NR_104285.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (15) has multiple differences compared to variant 6. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL045308, DB033043, U58996
- Related
-
ENST00000484552.6
-
NR_186779.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC008592, AC008951, AC104123
-
NR_186780.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC099509, AC104123
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
95961429..96774683
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
96462750..97275514
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_173061.2: Suppressed sequence
- Description
- NM_173061.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
-
NM_173062.1: Suppressed sequence
- Description
- NM_173062.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
-
NM_173063.1: Suppressed sequence
- Description
- NM_173063.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
-
NR_033798.1: Suppressed sequence
- Description
- NR_033798.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.