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    Smim31 small integral membrane protein 31 [ Mus musculus (house mouse) ]

    Gene ID: 407795, updated on 9-Dec-2024

    Summary

    Official Symbol
    Smim31provided by MGI
    Official Full Name
    small integral membrane protein 31provided by MGI
    Primary source
    MGI:MGI:3039572
    See related
    Ensembl:ENSMUSG00000074300 AllianceGenome:MGI:3039572
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EPR
    Summary
    Predicted to be located in membrane. Orthologous to human SMIM31 (small integral membrane protein 31). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in colon adult (RPKM 2.9), large intestine adult (RPKM 2.9) and 4 other tissues See more
    Orthologs
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    Genomic context

    See Smim31 in Genome Data Viewer
    Location:
    8 B3.1; 8 32.55 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (65538265..65582215, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (65085613..65129563, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_21646 Neighboring gene apelin receptor early endogenous ligand Neighboring gene STARR-seq mESC enhancer starr_21647 Neighboring gene STARR-seq mESC enhancer starr_21648 Neighboring gene predicted gene, 39183 Neighboring gene STARR-seq mESC enhancer starr_21650 Neighboring gene STARR-seq mESC enhancer starr_21651 Neighboring gene predicted gene 45445 Neighboring gene predicted gene, 48810 Neighboring gene predicted gene, 39184 Neighboring gene tubulin, alpha 1B pseudogene Neighboring gene STARR-seq mESC enhancer starr_21652 Neighboring gene STARR-seq mESC enhancer starr_21653 Neighboring gene 40S ribosomal protein S25 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in membrane  

    General protein information

    Preferred Names
    small integral membrane protein 31
    Names
    epithelial cell program regulator

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001352886.1NP_001339815.1  small integral membrane protein 31

      Status: VALIDATED

      Source sequence(s)
      AC102287, AK131860, BC030870
      Consensus CDS
      CCDS90402.1
      UniProtKB/Swiss-Prot
      Q3V2G4
      Related
      ENSMUSP00000147515.2, ENSMUST00000098713.5

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      65538265..65582215 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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