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    Fitm1 fat storage-inducing transmembrane protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 68680, updated on 27-Nov-2024

    Summary

    Official Symbol
    Fitm1provided by MGI
    Official Full Name
    fat storage-inducing transmembrane protein 1provided by MGI
    Primary source
    MGI:MGI:1915930
    See related
    Ensembl:ENSMUSG00000022215 AllianceGenome:MGI:1915930
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Fit1; Cg10671; 1110028A07Rik
    Summary
    Enables diacylglycerol binding activity and triglyceride binding activity. Involved in lipid droplet formation and positive regulation of sequestering of triglyceride. Located in endoplasmic reticulum membrane. Is expressed in genitourinary system; gut; liver; lung; and musculature. Orthologous to human FITM1 (fat storage inducing transmembrane protein 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in heart adult (RPKM 115.2), kidney adult (RPKM 41.7) and 4 other tissues See more
    Orthologs
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    Genomic context

    See Fitm1 in Genome Data Viewer
    Location:
    14 C3; 14 28.19 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (55813131..55814409)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (55575674..55576952)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E5439 Neighboring gene phosphoenolpyruvate carboxykinase 2 (mitochondrial) Neighboring gene STARR-seq mESC enhancer starr_36772 Neighboring gene STARR-positive B cell enhancer ABC_E607 Neighboring gene DDB1 and CUL4 associated factor 11 Neighboring gene proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) Neighboring gene ER membrane protein complex subunit 9 Neighboring gene STARR-positive B cell enhancer ABC_E5440 Neighboring gene proteasome (prosome, macropain) activator subunit 2 (PA28 beta)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1)  1 citation

    General gene information

    Markers

    Clone Names

    • MGC129516, MGC129517

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables coenzyme A diphosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables diacylglycerol binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables triglyceride binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in lipid droplet formation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in lipid droplet organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in lipid droplet organization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in lipid storage IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in phospholipid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in phospholipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of sequestering of triglyceride IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    fat storage-inducing transmembrane protein 1
    Names
    fat-inducing protein 1
    fat-inducing transcript 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026808.1NP_081084.1  fat storage-inducing transmembrane protein 1

      See identical proteins and their annotated locations for NP_081084.1

      Status: PROVISIONAL

      Source sequence(s)
      AB054000
      Consensus CDS
      CCDS27116.1
      UniProtKB/Swiss-Prot
      Q80ZL0, Q8CI63, Q91V79, Q9CTD0
      Related
      ENSMUSP00000022826.6, ENSMUST00000022826.7
      Conserved Domains (1) summary
      pfam10261
      Location:80264
      Scs3p; Inositol phospholipid synthesis and fat-storage-inducing TM

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      55813131..55814409
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)