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    Glyatl1 glycine-N-acyltransferase-like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 309227, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Glyatl1provided by RGD
    Official Full Name
    glycine-N-acyltransferase-like 1provided by RGD
    Primary source
    RGD:1564894
    See related
    EnsemblRapid:ENSRNOG00000036622 AllianceGenome:RGD:1564894
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1564894
    Summary
    Predicted to enable N-acyltransferase activity. Predicted to be active in mitochondrion. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 687.1) See more
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    Genomic context

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    See Glyatl1 in Genome Data Viewer
    Location:
    1q43
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (219091987..219117363)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (209667315..209692697)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (229039889..229055127)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene FAM111 trypsin like peptidase A Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene glycine-N-acyltransferase Neighboring gene olfactory receptor family 5 subfamily B member 95 like 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables N-acyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables glycine N-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    glycine-N-acyltransferase-like 1
    Names
    Glycine N-acyltransferase-like protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126278.1 → NP_001119750.1  glycine-N-acyltransferase-like 1

      See identical proteins and their annotated locations for NP_001119750.1

      Status: PROVISIONAL

      Source sequence(s)
      BC160862
      UniProtKB/TrEMBL
      A6I0E3, B1H250
      Conserved Domains (2) summary
      pfam08444
      Location:207 → 295
      Gly_acyl_tr_C; Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region
      pfam06021
      Location:1 → 206
      Gly_acyl_tr_N; Aralkyl acyl-CoA:amino acid N-acyltransferase

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      219091987..219117363
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039079883.2 → XP_038935811.1  glycine-N-acyltransferase-like 1 isoform X1

      UniProtKB/TrEMBL
      A6I0E3, B1H250
      Related
      ENSRNOP00000051684.2, ENSRNOT00000054800.4
      Conserved Domains (2) summary
      pfam08444
      Location:207 → 295
      Gly_acyl_tr_C; Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region
      pfam06021
      Location:1 → 206
      Gly_acyl_tr_N; Aralkyl acyl-CoA:amino acid N-acyltransferase

    2. XM_039079886.2 → XP_038935814.1  glycine-N-acyltransferase-like 1 isoform X2

      UniProtKB/TrEMBL
      A6I0E3
      Conserved Domains (2) summary
      pfam08444
      Location:174 → 262
      Gly_acyl_tr_C; Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region
      pfam06021
      Location:1 → 173
      Gly_acyl_tr_N; Aralkyl acyl-CoA:amino acid N-acyltransferase
    Nucleotide Protein Strain
    Heading Accession and Version

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