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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001108231.1 → NP_001101701.1 ankyrin repeat and SOCS box protein 18
See identical proteins and their annotated locations for NP_001101701.1
Status: PROVISIONAL
- Source sequence(s)
-
CH473997
- UniProtKB/TrEMBL
- A0A8I6A7E9, A6JQK8, D3ZU92
- Related
- ENSRNOP00000044574.5, ENSRNOT00000040169.6
- Conserved Domains (5) summary
-
- cd00204
Location:122 → 237
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- cd03723
Location:420 → 467
- SOCS_ASB4_ASB18; SOCS (suppressors of cytokine signaling) box of ASB4 and ASB18 proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Asb4 was identified as imprinted gene in mice. The general function of the SOCS box is the ...
- pfam12796
Location:124 → 214
- Ank_2; Ankyrin repeats (3 copies)
- pfam13857
Location:283 → 334
- Ank_5; Ankyrin repeats (many copies)
- sd00045
Location:122 → 149
- ANK; ANK repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086027.1 Reference GRCr8
- Range
-
97979018..98043609 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_039083755.2 → XP_038939683.1 ankyrin repeat and SOCS box protein 18 isoform X1
- UniProtKB/TrEMBL
-
A0A8I6A7E9
- Related
- ENSRNOP00000104186.1, ENSRNOT00000131821.1
- Conserved Domains (4) summary
-
- PTZ00322
Location:242 → 325
- PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
- cd03723
Location:379 → 426
- SOCS_ASB4_ASB18; SOCS (suppressors of cytokine signaling) box of ASB4 and ASB18 proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Asb4 was identified as imprinted gene in mice. The general function of the SOCS box is the ...
- sd00045
Location:81 → 108
- ANK; ANK repeat [structural motif]
- pfam12796
Location:115 → 208
- Ank_2; Ankyrin repeats (3 copies)
-
XM_039083757.2 → XP_038939685.1 ankyrin repeat and SOCS box protein 18 isoform X3
- UniProtKB/TrEMBL
-
A0A8I6A7E9
- Conserved Domains (4) summary
-
- PTZ00322
Location:196 → 279
- PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
- cd03723
Location:333 → 380
- SOCS_ASB4_ASB18; SOCS (suppressors of cytokine signaling) box of ASB4 and ASB18 proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. Asb4 was identified as imprinted gene in mice. The general function of the SOCS box is the ...
- sd00045
Location:35 → 62
- ANK; ANK repeat [structural motif]
- pfam12796
Location:69 → 162
- Ank_2; Ankyrin repeats (3 copies)
-
XM_063267314.1 → XP_063123384.1 ankyrin repeat and SOCS box protein 18 isoform X4
-
XM_039083756.2 → XP_038939684.1 ankyrin repeat and SOCS box protein 18 isoform X2
- Conserved Domains (3) summary
-
- PTZ00322
Location:254 → 362
- PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
- sd00045
Location:93 → 120
- ANK; ANK repeat [structural motif]
- pfam12796
Location:127 → 220
- Ank_2; Ankyrin repeats (3 copies)