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    erd-2.1 ER lumen protein-retaining receptor erd-2.1 [ Caenorhabditis elegans ]

    Gene ID: 181228, updated on 9-Dec-2024

    Summary

    Official Symbol
    erd-2.1
    Official Full Name
    ER lumen protein-retaining receptor erd-2.1
    Primary source
    WormBase:WBGene00001331
    Locus tag
    CELE_F09B9.3
    See related
    AllianceGenome:WB:WBGene00001331
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ER retention sequence binding activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in cis-Golgi network and endoplasmic reticulum. Is expressed in several structures, including enteric muscle; head mesodermal cell; hermaphrodite distal tip cell; hypodermis; and nervous system. Human ortholog(s) of this gene implicated in osteogenesis imperfecta type 21. Orthologous to several human genes including KDELR2 (KDEL endoplasmic reticulum protein retention receptor 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See erd-2.1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    6
    Sequence:
    Chromosome: X; NC_003284.9 (10156858..10158829, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Actin-binding lim zn-finger protein limatin involved in axon guidance Neighboring gene tRNA-Arg Neighboring gene ncRNA Neighboring gene SCP domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ER retention sequence binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables ER retention sequence binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in IRE1-mediated unfolded protein response HEP PubMed 
    involved_in protein retention in ER lumen IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein retention in ER lumen IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cis-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ER lumen protein-retaining receptor erd-2.1
    NP_001366716.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      10156858..10158829 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001381076.3NP_001366716.1  ER lumen protein-retaining receptor erd-2.1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O76766, P48583
      Conserved Domains (1) summary
      pfam00810
      Location:28169
      ER_lumen_recept; ER lumen protein retaining receptor