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    acs-12 4-coumarate--CoA ligase 1-like [ Caenorhabditis elegans ]

    Gene ID: 180375, updated on 9-Dec-2024

    Summary

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    Official Symbol
    acs-12
    Official Full Name
    4-coumarate--CoA ligase 1-like
    Primary source
    WormBase:WBGene00009106
    Locus tag
    CELE_F25C8.4
    See related
    AllianceGenome:WB:WBGene00009106
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable CoA-ligase activity. Predicted to be located in peroxisome. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See acs-12 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (20904169..20907433)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Protein unc-80 Neighboring gene ncRNA Neighboring gene Amine oxidase domain-containing protein Neighboring gene pseudo Neighboring gene putative tubulin polyglutamylase ttll-9

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics and functional study of lipid metabolic genes in Caenorhabditis elegans. Zhang Y, et al. BMC Genomics, 2013 Mar 12. PMID 23496871, Free PMC Article
    2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables CoA-ligase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    4-coumarate--CoA ligase 1-like
    NP_508035.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      20904169..20907433
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075634.5 → NP_508035.1  4-coumarate--CoA ligase 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508035.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XV68
      Conserved Domains (2) summary
      cd05911
      Location:33 → 514
      Firefly_Luc_like; Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL)
      PLN02246
      Location:2 → 518
      PLN02246; 4-coumarate--CoA ligase
    Nucleotide Protein
    Heading Accession and Version

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