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    F08D12.7 DUF19 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173621, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F08D12.7
    Official Full Name
    DUF19 domain-containing protein
    Primary source
    WormBase:WBGene00017250
    Locus tag
    CELE_F08D12.7
    See related
    AllianceGenome:WB:WBGene00017250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in several structures, including enteric muscle; hermaphrodite distal tip cell; neurons; ventral nerve cord; and vulval muscle. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F08D12.7 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (2767250..2769121, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene F-box domain-containing protein Neighboring gene F-box associated domain-containing protein Neighboring gene F-box domain-containing protein Neighboring gene F-box domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    DUF19 domain-containing protein
    NP_494356.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      2767250..2769121 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061955.3 → NP_494356.1  DUF19 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494356.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      P91230
      Conserved Domains (1) summary
      pfam01579
      Location:32 → 167
      DUF19; Domain of unknown function (DUF19)
    Nucleotide Protein
    Heading Accession and Version

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