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    F01F1.2 COX assembly mitochondrial protein [ Caenorhabditis elegans ]

    Gene ID: 175828, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F01F1.2
    Official Full Name
    COX assembly mitochondrial protein
    Primary source
    WormBase:WBGene00017159
    Locus tag
    CELE_F01F1.2
    See related
    AllianceGenome:WB:WBGene00017159
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in mitochondrion. Is expressed in body wall musculature; intestine; and pharyngeal muscle cell. Orthologous to human CMC1 (C-X9-C motif containing 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F01F1.2 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003281.10 (5878554..5879415)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene MIF4G domain-containing protein Neighboring gene Fructose-bisphosphate aldolase 2 Neighboring gene Abnormal cell migration protein 21 Neighboring gene ncRNA Neighboring gene SAC3/GANP/THP3 conserved domain-containing protein;SAC3_GANP domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ShKT domain-containing protein Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    COX assembly mitochondrial protein
    NP_498273.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      5878554..5879415
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065872.7 → NP_498273.1  COX assembly mitochondrial protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498273.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q19093
      Conserved Domains (1) summary
      pfam08583
      Location:65 → 135
      Cmc1; Cytochrome c oxidase biogenesis protein Cmc1 like
    Nucleotide Protein
    Heading Accession and Version

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