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    Y37H2A.1 Deoxyribonuclease TATDN2 [ Caenorhabditis elegans ]

    Gene ID: 180186, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y37H2A.1
    Official Full Name
    Deoxyribonuclease TATDN2
    Primary source
    WormBase:WBGene00012562
    Locus tag
    CELE_Y37H2A.1
    See related
    AllianceGenome:WB:WBGene00012562
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable hydrolase activity, acting on ester bonds. Orthologous to human TATDN2 (TatD DNase domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y37H2A.1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (18108269..18114755)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Synthetic with Lin-35/Rb Neighboring gene Serine/threonine-protein kinase par-4 Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene F-box domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional identification of microRNA-centered complexes in C. elegans. Hebbar S, et al. Sci Rep, 2022 May 3. PMID 35504914, Free PMC Article
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Deoxyribonuclease TATDN2
    NP_001256781.1
    • Confirmed by transcript evidence
    NP_001256782.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      18108269..18114755
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269852.2 → NP_001256781.1  Deoxyribonuclease TATDN2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256781.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U2N7
      Conserved Domains (1) summary
      pfam01026
      Location:177 → 473
      TatD_DNase; TatD related DNase

    2. NM_001269853.3 → NP_001256782.1  Deoxyribonuclease TATDN2 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256782.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F3Y5R9
      Conserved Domains (1) summary
      pfam01026
      Location:102 → 398
      TatD_DNase; TatD related DNase
    Nucleotide Protein
    Heading Accession and Version

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