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    rps-29 Small ribosomal subunit protein uS14 [ Caenorhabditis elegans ]

    Gene ID: 175235, updated on 9-Dec-2024

    Summary

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    Official Symbol
    rps-29
    Official Full Name
    Small ribosomal subunit protein uS14
    Primary source
    WormBase:WBGene00004498
    Locus tag
    CELE_B0412.4
    See related
    AllianceGenome:WB:WBGene00004498
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable zinc ion binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Is expressed in several structures, including excretory cell; intestinal muscle; nervous system; pharynx; and reproductive system. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 13. Orthologous to human RPS29 (ribosomal protein S29). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See rps-29 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003281.10 (794300..795031)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene sn-1-specific diacylglycerol lipase Neighboring gene Protein phosphatase ppm-1.G Neighboring gene Synaptotagmin 2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Foie-gras_1 domain-containing protein;TRAPP II complex TRAPPC10 C-terminal domain-containing protein;Trafficking protein particle complex subunit 11 domain-containing protein Neighboring gene Dauer larva development regulatory growth factor daf-7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation of eight novel Caenorhabditis elegans small RNAs. Wachi M, et al. Gene, 2004 Jun 23. PMID 15194189
    2. Nucleolar proteins suppress Caenorhabditis elegans innate immunity by inhibiting p53/CEP-1. Fuhrman LE, et al. PLoS Genet, 2009 Sep. PMID 19763173, Free PMC Article
    3. Functional genomic identification of genes required for male gonadal differentiation in Caenorhabditis elegans. Kalis AK, et al. Genetics, 2010 Jun. PMID 20308279, Free PMC Article
    4. Delayed development and lifespan extension as features of metabolic lifestyle alteration in C. elegans under dietary restriction. Szewczyk NJ, et al. J Exp Biol, 2006 Oct. PMID 17023606
    5. CCAR-1 works together with the U2AF large subunit UAF-1 to regulate alternative splicing. Lugano DI, et al. RNA Biol, 2024 Jan. PMID 38126797, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Small ribosomal subunit protein uS14
    NP_001379573.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      794300..795031
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001393266.1 → NP_001379573.1  Small ribosomal subunit protein uS14 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      P90983
      Conserved Domains (1) summary
      PTZ00218
      Location:5 → 56
      PTZ00218; 40S ribosomal protein S29; Provisional
    Nucleotide Protein
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