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    C50F4.16 Nudix hydrolase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179337, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C50F4.16
    Official Full Name
    Nudix hydrolase domain-containing protein
    Primary source
    WormBase:WBGene00008238
    Locus tag
    CELE_C50F4.16
    See related
    AllianceGenome:WB:WBGene00008238
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable UDP-sugar diphosphatase activity. Predicted to be involved in nucleoside phosphate metabolic process and ribose phosphate metabolic process. Orthologous to human NUDT14 (nudix hydrolase 14). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C50F4.16 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (9539845..9541606, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Cysteine proteinase Neighboring gene COMM domain-containing protein Neighboring gene Transcription termination factor 3, mitochondrial Neighboring gene uncharacterized protein Neighboring gene Histone H2A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables UDP-sugar diphosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in nucleoside phosphate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in ribose phosphate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Nudix hydrolase domain-containing protein
    NP_505461.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      9539845..9541606 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073060.7 → NP_505461.1  Nudix hydrolase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505461.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95ZW9
      Conserved Domains (1) summary
      cd03424
      Location:44 → 216
      ADPRase_NUDT5; ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, ...
    Nucleotide Protein
    Heading Accession and Version

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