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    tre-1 Trehalase [ Caenorhabditis elegans ]

    Gene ID: 172371, updated on 9-Dec-2024

    Summary

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    Official Symbol
    tre-1
    Official Full Name
    Trehalase
    Primary source
    WormBase:WBGene00006607
    Locus tag
    CELE_F57B10.7
    See related
    AllianceGenome:WB:WBGene00006607
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable alpha,alpha-trehalase activity. Predicted to be involved in trehalose catabolic process. Orthologous to human TREH (trehalase). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See tre-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    9
    Sequence:
    Chromosome: I; NC_003279.8 (6554729..6558665)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad-1 Neighboring gene ncRNA Neighboring gene XPG (Xeroderma Pigmentosum group G) DNA repair gene homolog Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Disruption of O-GlcNAc Cycling in C. elegans Perturbs Nucleotide Sugar Pools and Complex Glycans. Ghosh SK, et al. Front Endocrinol (Lausanne), 2014. PMID 25505447, Free PMC Article
    2. Trehalose metabolism genes in Caenorhabditis elegans and filarial nematodes. Pellerone FI, et al. Int J Parasitol, 2003 Sep 30. PMID 13678635
    3. Genetic and biochemical analysis of TGF beta signal transduction. Padgett RW, et al. Cytokine Growth Factor Rev, 1997 Mar. PMID 9174659
    4. An integrated strategy to study muscle development and myofilament structure in Caenorhabditis elegans. Meissner B, et al. PLoS Genet, 2009 Jun. PMID 19557190, Free PMC Article
    5. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables alpha,alpha-trehalase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables alpha,alpha-trehalase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, acting on glycosyl bonds IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in trehalose catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in trehalose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Trehalase
    NP_491890.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      6554729..6558665
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059489.7 → NP_491890.2  Trehalase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491890.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EC40
      Conserved Domains (2) summary
      COG1626
      Location:9 → 542
      TreA; Neutral trehalase [Carbohydrate transport and metabolism]
      cl17346
      Location:28 → 536
      Trehalase; Trehalase
    Nucleotide Protein
    Heading Accession and Version

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