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    • Showing Current items.

    lips-1 Lipase [ Caenorhabditis elegans ]

    Gene ID: 185800, updated on 9-Dec-2024

    Summary

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    Official Symbol
    lips-1
    Official Full Name
    Lipase
    Primary source
    WormBase:WBGene00009727
    Locus tag
    CELE_F45E6.4
    See related
    AllianceGenome:WB:WBGene00009727
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable lipase activity. Predicted to be involved in lipid catabolic process. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See lips-1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Sequence:
    Chromosome: X; NC_003284.9 (12492767..12496041)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Transcription factor atf-6 homolog Neighboring gene Rab-GAP TBC domain-containing protein Neighboring gene ncRNA Neighboring gene SKN-1 Dependent Zygotic transcript Neighboring gene Suppressor of Constitutive Dauer formation Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics and functional study of lipid metabolic genes in Caenorhabditis elegans. Zhang Y, et al. BMC Genomics, 2013 Mar 12. PMID 23496871, Free PMC Article
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables lipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipid catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in lipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Lipase
    NP_510096.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      12492767..12496041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077695.5 → NP_510096.1  Lipase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_510096.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20437
      Conserved Domains (1) summary
      pfam01674
      Location:67 → 316
      Lipase_2; Lipase (class 2)
    Nucleotide Protein
    Heading Accession and Version

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