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    C05C8.1 ATP synthase subunit s, mitochondrial [ Caenorhabditis elegans ]

    Gene ID: 179119, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C05C8.1
    Official Full Name
    ATP synthase subunit s, mitochondrial
    Primary source
    WormBase:WBGene00015460
    Locus tag
    CELE_C05C8.1
    See related
    AllianceGenome:WB:WBGene00015460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in intestine; nervous system; and rectal gland cell. Orthologous to human DMAC2L (distal membrane arm assembly component 2 like). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C05C8.1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (7239771..7241366)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene BTB/POZ domain-containing protein 9 Neighboring gene Centriolar and ciliogenesis-associated protein hyls-1;Hydrolethalus syndrome protein 1 homolog Neighboring gene mannose-6-phosphate isomerase Neighboring gene Glycosyltransferase family 92 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein interaction mapping in C. elegans using proteins involved in vulval development. Walhout AJ, et al. Science, 2000 Jan 7. PMID 10615043
    2. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article
    3. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
    4. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
    5. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    ATP synthase subunit s, mitochondrial
    NP_001122840.1
    • Confirmed by transcript evidence
    NP_504842.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      7239771..7241366
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_072441.7 → NP_504842.1  ATP synthase subunit s, mitochondrial [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_504842.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O16314
      Conserved Domains (1) summary
      sd00034
      Location:141 → 165
      LRR_AMN1; leucine-rich repeat [structural motif]

    2. NM_001129368.5 → NP_001122840.1  ATP synthase subunit s, mitochondrial [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001122840.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A6PVA5
      Conserved Domains (2) summary
      cd09293
      Location:73 → 199
      AMN1; Antagonist of mitotic exit network protein 1
      sd00034
      Location:140 → 164
      LRR_AMN1; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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