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    T28F4.4 Inverted formin-2;PUM-HD domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172502, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T28F4.4
    Official Full Name
    Inverted formin-2;PUM-HD domain-containing protein
    Primary source
    WormBase:WBGene00012139
    Locus tag
    CELE_T28F4.4
    See related
    AllianceGenome:WB:WBGene00012139
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in anatomical structure morphogenesis. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in ACTH-independent macronodular adrenal hyperplasia 2. Orthologous to human ARMC5 (armadillo repeat containing 5). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T28F4.4 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    14
    Sequence:
    Chromosome: I; NC_003279.8 (7486648..7494736, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Degenerin-like protein asic-2 Neighboring gene Protein-tyrosine phosphatase Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Bromo domain-containing protein;HMG box domain-containing protein Neighboring gene ncRNA Neighboring gene SH3 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in anatomical structure morphogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Inverted formin-2;PUM-HD domain-containing protein
    NP_001368639.1
    • Confirmed by transcript evidence
    NP_492101.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      7486648..7494736 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059700.8 → NP_492101.1  PUM-HD domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492101.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22853

    2. NM_001380711.2 → NP_001368639.1  Inverted formin-2 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1T5HUH9
    Nucleotide Protein
    Heading Accession and Version

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