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    K08E7.5 Mucin-5AC;Prion-like-(Q/N-rich)-domain-bearing protein [ Caenorhabditis elegans ]

    Gene ID: 178211, updated on 18-Sep-2024

    Summary

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    Official Symbol
    K08E7.5
    Official Full Name
    Mucin-5AC;Prion-like-(Q/N-rich)-domain-bearing protein
    Primary source
    WormBase:WBGene00010673
    Locus tag
    CELE_K08E7.5
    See related
    AllianceGenome:WB:WBGene00010673
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See K08E7.5 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    16
    Sequence:
    Chromosome: IV; NC_003282.8 (12573368..12578871)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Protein let-99 Neighboring gene Uncharacterized protein Neighboring gene Myb_DNA-bind_5 domain-containing protein Neighboring gene Leucine-rich repeat domain-containing protein Neighboring gene Cullin-6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A combined binary interaction and phenotypic map of C. elegans cell polarity proteins. Koorman T, et al. Nat Cell Biol, 2016 Mar. PMID 26780296, Free PMC Article
    2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Mucin-5AC;Prion-like-(Q/N-rich)-domain-bearing protein
    NP_001040965.3
    • Confirmed by transcript evidence
    NP_001040966.2
    • Confirmed by transcript evidence
    NP_001040967.1
    • Confirmed by transcript evidence
    NP_001040968.2
    • Confirmed by transcript evidence
    NP_001255651.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12573368..12578871
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268722.4 → NP_001255651.2  Prion-like-(Q/N-rich)-domain-bearing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255651.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2FLI2

    2. NM_001047500.4 → NP_001040965.3  Prion-like-(Q/N-rich)-domain-bearing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040965.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21344
      Conserved Domains (1) summary
      PHA03247
      Location:306 → 760
      PHA03247; large tegument protein UL36; Provisional

    3. NM_001047501.5 → NP_001040966.2  Prion-like-(Q/N-rich)-domain-bearing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040966.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q2XMZ7

    4. NM_001047502.4 → NP_001040967.1  Mucin-5AC [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040967.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q2XMZ6
      Conserved Domains (1) summary
      PTZ00449
      Location:63 → 375
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional

    5. NM_001047503.5 → NP_001040968.2  Prion-like-(Q/N-rich)-domain-bearing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040968.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q2XMZ5
    Nucleotide Protein
    Heading Accession and Version

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