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    bus-19 VTT domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179766, updated on 9-Dec-2024

    Summary

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    Official Symbol
    bus-19
    Official Full Name
    VTT domain-containing protein
    Primary source
    WormBase:WBGene00011590
    Locus tag
    CELE_T07F10.4
    See related
    AllianceGenome:WB:WBGene00011590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM41A (transmembrane protein 41A). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See bus-19 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    9
    Sequence:
    Chromosome: V; NC_003283.11 (12872053..12882119)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene DUF19 domain-containing protein Neighboring gene BRCT domain-containing protein Neighboring gene RRM domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GLOBIN domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Loss of egli-1, the Caenorhabditis elegans Orthologue of a Downstream Target of SMN, Leads to Abnormalities in Sensorimotor Integration. Da Silva JD, et al. Mol Neurobiol, 2020 Mar. PMID 31797327
    2. Mos1 mutagenesis reveals a diversity of mechanisms affecting response of Caenorhabditis elegans to the bacterial pathogen Microbacterium nematophilum. Yook K, et al. Genetics, 2007 Feb. PMID 17151260, Free PMC Article
    3. Aripiprazole Offsets Mutant ATXN3-Induced Motor Dysfunction by Targeting Dopamine D(2) and Serotonin 1A and 2A Receptors in C. elegans. Jalles A, et al. Biomedicines, 2022 Feb 3. PMID 35203579, Free PMC Article
    4. Isolation and molecular identification of nematode surface mutants with resistance to bacterial pathogens. O'Rourke D, et al. G3 (Bethesda), 2023 May 2. PMID 36911920, Free PMC Article
    5. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    VTT domain-containing protein
    NP_001041162.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12872053..12882119
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001047697.5 → NP_001041162.1  VTT domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001041162.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22316
      Conserved Domains (1) summary
      pfam09335
      Location:79 → 199
      SNARE_assoc; SNARE associated Golgi protein

    RNA

    1. NR_003174.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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