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    • Showing Current items.

    nhr-218 Nuclear hormone receptor family member nhr-218 [ Caenorhabditis elegans ]

    Gene ID: 188479, updated on 9-Dec-2024

    Summary

    Official Symbol
    nhr-218
    Official Full Name
    Nuclear hormone receptor family member nhr-218
    Primary source
    WormBase:WBGene00011750
    Locus tag
    CELE_T13F3.2
    See related
    AllianceGenome:WB:WBGene00011750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See nhr-218 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (16258442..16260687)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Receptor-type guanylate cyclase gcy-20 Neighboring gene B3GNT1, Beta-1,3-N-acetylGucosamiNylTransferase 1, homolog Neighboring gene Nuclear hormone receptor family member nhr-127 Neighboring gene DUF19 domain-containing protein Neighboring gene pseudo

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Nuclear hormone receptor family member nhr-218
    NP_507103.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      16258442..16260687
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074702.5NP_507103.2  Nuclear hormone receptor family member nhr-218 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507103.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O18086
      Conserved Domains (2) summary
      smart00399
      Location:1989
      ZnF_C4; c4 zinc finger in nuclear hormone receptors
      pfam00104
      Location:177376
      Hormone_recep; Ligand-binding domain of nuclear hormone receptor

    RNA

    1. NR_024312.1 RNA Sequence

      Status: REVIEWED