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    F07F6.7 Apolipoprotein L, 1 [ Caenorhabditis elegans ]

    Gene ID: 260090, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F07F6.7
    Official Full Name
    Apolipoprotein L, 1
    Primary source
    WormBase:WBGene00017219
    Locus tag
    CELE_F07F6.7
    See related
    AllianceGenome:WB:WBGene00017219
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable lipid binding activity. Predicted to be involved in lipid transport and lipoprotein metabolic process. Predicted to be located in extracellular region. Orthologous to human APOL3 (apolipoprotein L3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F07F6.7 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (5422735..5423858, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene PHR domain-containing protein Neighboring gene ncRNA Neighboring gene Embryonic developmental protein tofu-6 Neighboring gene Apolipoprotein L3-like Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables lipid binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in lipoprotein metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Apolipoprotein L, 1
    NP_740988.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      5422735..5423858 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_170990.2 → NP_740988.1  Apolipoprotein L, 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_740988.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8WQF8
      Conserved Domains (1) summary
      pfam05461
      Location:4 → 247
      ApoL; Apolipoprotein L
    Nucleotide Protein
    Heading Accession and Version

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